RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 HCN1O60741 890 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 ADAM11O75078 769 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 PEPDP12955 493 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 FPR3P25089 353 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 SFTPDP35247 375 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 SLC9A3P48764 834 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 CD97P48960 835 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 FOXO1Q12778 655 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 KLRB1Q12918 225 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 SF3B4Q15427 424 aaKnown RBP eCLIP10.13□□□□□ -0.793e-8■■■■■ 40.9
SHMT2-220ENST00000555634 INPP5JQ15735 1006 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-220ENST00000555634 TOMM34Q15785 309 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-220ENST00000555634 ANKDD1AQ495B1 522 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 IQCCQ4KMZ1 466 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 WIPI1Q5MNZ9 446 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-220ENST00000555634 FAM69AQ5T7M9 428 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 OGFRL1Q5TC84 451 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-220ENST00000555634 C1orf140Q5VVS0 124 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 MAMDC2Q7Z304 686 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-220ENST00000555634 YRDCQ86U90 279 aaKnown RBP10.13□□□□□ -0.79
SHMT2-220ENST00000555634 NKAIN4Q8IVV8 208 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 SLC43A2Q8N370 569 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 ZNF555Q8NEP9 628 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 OR9Q2Q8NGE9 314 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 OR4C15Q8NGM1 316 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 TEX47Q8TBZ9 253 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 FANK1Q8TC84 345 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 MAGEE2Q8TD90 523 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-220ENST00000555634 FAM46AQ96IP4 442 aaKnown RBP10.13□□□□□ -0.79
SHMT2-220ENST00000555634 KLHL15Q96M94 604 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 OR5B2Q96R09 309 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 ZNF426Q9BUY5 554 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 SLC25A18Q9H1K4 315 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 FKRPQ9H9S5 495 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 ACKR4Q9NPB9 350 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 NANSQ9NR45 359 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 MAN2C1Q9NTJ4 1040 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 HDGFL3Q9Y3E1 203 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 ZNF337Q9Y3M9 751 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 CORINQ9Y5Q5 1042 aa10.13□□□□□ -0.79
SHMT2-220ENST00000555634 MAP1BP46821 2468 aaKnown RBP10.12□□□□□ -0.79
SHMT2-220ENST00000555634 A0A087WUU8 490 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 TMEM72A0PK05 275 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 H3BN98 237 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 ADAM10O14672 748 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 SEC14L5O43304 696 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 DNPH1O43598 174 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 SEMA7AO75326 666 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 RCBTB2O95199 551 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 NTN1O95631 604 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 BMP7P18075 431 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 MST1P26927 711 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 GPR4P46093 362 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 RPS5P46782 204 aaKnown RBP10.12□□□□□ -0.79
SHMT2-220ENST00000555634 LIMS1P48059 325 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 IST1P53990 364 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 TPD52P55327 224 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-220ENST00000555634 CTBP2P56545 445 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 RAC1P63000 192 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 SLC35A1P78382 337 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 PMP22Q01453 160 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 PRKCDQ05655 676 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 COX10Q12887 443 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 WLSQ5T9L3 541 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 LPCAT4Q643R3 524 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 ARHGAP11AQ6P4F7 1023 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 ESPNLQ6ZVH7 1005 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 TSEN54Q7Z6J9 526 aaKnown RBP10.12□□□□□ -0.79
SHMT2-220ENST00000555634 OAFQ86UD1 273 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 EPHX4Q8IUS5 362 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 PM20D2Q8IYS1 436 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 RBMXL3Q8N7X1 1067 aaKnown RBP10.12□□□□□ -0.79
SHMT2-220ENST00000555634 OR6S1Q8NH40 331 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 NEIL3Q8TAT5 605 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 GTPBP3Q969Y2 492 aaKnown RBP10.12□□□□□ -0.79
SHMT2-220ENST00000555634 SARAFQ96BY9 339 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 NTNG2Q96CW9 530 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 FEVQ99581 238 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 RSPO3Q9BXY4 272 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-220ENST00000555634 DGCR6LQ9BY27 220 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 POTEKPQ9BYX7 375 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 UCK2Q9BZX2 261 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 TMEM185BQ9H7F4 350 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 ZDHHC11Q9H8X9 412 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 NTN4Q9HB63 628 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 TBC1D23Q9NUY8 699 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 ALKBH4Q9NXW9 302 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 SMPD3Q9NY59 655 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-220ENST00000555634 VNN3Q9NY84 501 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 USE1Q9NZ43 259 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 NKX1-2Q9UD57 310 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-220ENST00000555634 ZNF229Q9UJW7 825 aa10.12□□□□□ -0.79
SHMT2-220ENST00000555634 SETXQ7Z333 2677 aaKnown RBP10.11□□□□□ -0.79
SHMT2-220ENST00000555634 UNC119BA6NIH7 251 aa10.11□□□□□ -0.79
SHMT2-220ENST00000555634 SHISA8B8ZZ34 492 aa10.11□□□□□ -0.79
SHMT2-220ENST00000555634 PDLIM1O00151 329 aa10.11□□□□□ -0.79
SHMT2-220ENST00000555634 SULT2B1O00204 365 aa10.11□□□□□ -0.79
SHMT2-220ENST00000555634 EIF1AYO14602 144 aaKnown RBP10.11□□□□□ -0.79
SHMT2-220ENST00000555634 PIP5K1CO60331 668 aa10.11□□□□□ -0.79
SHMT2-220ENST00000555634 EIF1BO60739 113 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms