RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 WDR7Q9Y4E6 1490 aa3.91□□□□□ -1.78
CKS1BP1-201ENST00000555221 MTUS2Q5JR59 1369 aa3.9□□□□□ -1.78
CKS1BP1-201ENST00000555221 CASKIN1Q8WXD9 1431 aa3.9□□□□□ -1.78
CKS1BP1-201ENST00000555221 VSTM2BA6NLU5 285 aa3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 MPHOSPH10O00566 681 aaKnown RBP3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 CXCL11O14625 94 aa3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 AP2A1O95782 977 aa3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 CAPN1P07384 714 aa3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 POU2F1P14859 743 aa3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 ZBTB25P24278 435 aa3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 RIPK4P57078 832 aa3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 EGFEM1PQ0D2K5 195 aa3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 SFT2D3Q587I9 215 aa3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 ZNF100Q8IYN0 542 aa3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 EIF1ADQ8N9N8 165 aaKnown RBP3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 BBS1Q8NFJ9 593 aa3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 OR56B4Q8NH76 319 aa3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 SEC22AQ96IW7 307 aa3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 CCNL2Q96S94 520 aaPredicted RBP3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 NPAS2Q99743 824 aa3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 CAPS2Q9BXY5 557 aa3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 PARD6BQ9BYG5 372 aa3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 YTHDF1Q9BYJ9 559 aaKnown RBP3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 CLEC4AQ9UMR7 237 aa3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 KIF25-AS1Q9Y6Z4 181 aa3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 KIAA0556O60303 1618 aa3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 CCDC18Q5T9S5 1454 aa3.9□□□□□ -1.79
CKS1BP1-201ENST00000555221 FHOD3Q2V2M9 1422 aa3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 A0A1B0GUS0 222 aa3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 HELTA6NFD8 242 aa3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 K7N7A8 449 aa3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 HDAC3O15379 428 aa3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 PFKFB2O60825 505 aa3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 IGHV3-48P01763 117 aa3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 AQP1P29972 269 aa3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 SSR1P43307 286 aaKnown RBP3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 CCT3P49368 545 aaKnown RBP3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 AIF1P55008 147 aa3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 ASPHQ12797 758 aa3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 RNF212Q495C1 297 aa3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 CEP55Q53EZ4 464 aa3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 OR4F3Q6IEY1 312 aa3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 ACOT7LQ6ZUV0 252 aa3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 EFL1Q7Z2Z2 1120 aaKnown RBP3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 PRR22Q8IZ63 422 aa3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 LRRC75A-AS1Q8N1F1 130 aa3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 BHLHE23Q8NDY6 225 aa3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 TRPV1Q8NER1 839 aa3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 SECISBP2Q96T21 854 aaKnown RBP3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 ZBTB18Q99592 522 aa3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 GAL3ST1Q99999 423 aa3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 MARCH5Q9NX47 278 aa3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 CD274Q9NZQ7 290 aa3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 RPAP1Q9BWH6 1393 aaPredicted RBP3.89□□□□□ -1.79
CKS1BP1-201ENST00000555221 CEP162Q5TB80 1403 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 CTTNBP2Q8WZ74 1663 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 ARHGAP35Q9NRY4 1499 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 CYSRT1A8MQ03 144 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 IDSB3KWA1 339 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 HIP1O00291 1037 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 ZNF264O43296 627 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 PRKAB2O43741 272 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 SURF6O75683 361 aaKnown RBP3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 IL1BP01584 269 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 OPN1MWP04001 364 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 OPN1MW2P0DN77 364 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 OPN1MW3P0DN78 364 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 SLC15A2Q16348 729 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 C1orf220Q5T0J3 134 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 UNQ9370/PRO34162Q6UXP9 181 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 SCARA5Q6ZMJ2 495 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 VRK2Q86Y07 508 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 CCDC65Q8IXS2 484 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 OR2L13Q8N349 312 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 TMEM252Q8N6L7 170 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 ALLCQ8N6M5 410 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 MFSD9Q8NBP5 474 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 CATSPER1Q8NEC5 780 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 OR2AP1Q8NGE2 309 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 OR5D13Q8NGL4 314 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 ZNF564Q8TBZ8 553 aaPredicted RBP3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 OR1E3Q8WZA6 343 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 ST8SIA1Q92185 356 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 C16orf74Q96GX8 76 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 PGLYRP4Q96LB8 373 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 KLHDC3Q9BQ90 382 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 ZDHHC11Q9H8X9 412 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 NHEJ1Q9H9Q4 299 aaPredicted RBP3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 BTNL2Q9UIR0 455 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 IFT52Q9Y366 437 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 EPRSP07814 1512 aaKnown RBP3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 ABCA8O94911 1581 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 GLI2P10070 1586 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 CCNB3Q8WWL7 1395 aa3.88□□□□□ -1.79
CKS1BP1-201ENST00000555221 PLCH2O75038 1416 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 TROQ12816 1431 aaPredicted RBP3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 NEO1Q92859 1461 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 FYCO1Q9BQS8 1478 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 MAGI3Q5TCQ9 1506 aa3.87□□□□□ -1.79
CKS1BP1-201ENST00000555221 MED7O43513 233 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms