RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 NOSIPQ9Y314 301 aaKnown RBP6.45□□□□□ -1.38
SYNE2-216ENST00000555002 H7C1C5 153 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 FABP1P07148 127 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 THBS1P07996 1170 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 RRADP55042 308 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 PRPS1P60891 318 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 LCN6P62502 163 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 POU3F1Q03052 451 aaPredicted RBP6.45□□□□□ -1.38
SYNE2-216ENST00000555002 ZP2Q05996 745 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 NADSYN1Q6IA69 706 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 GLB1L2Q8IW92 636 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 SCML4Q8N228 414 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 WDR31Q8NA23 367 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 GPR148Q8TDV2 347 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 SMOQ99835 787 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 FAM103A1Q9BTL3 118 aaKnown RBP6.45□□□□□ -1.38
SYNE2-216ENST00000555002 C1QTNF6Q9BXI9 259 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 CNTNAP3Q9BZ76 1288 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 ULBP2Q9BZM5 246 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 ZNF334Q9HCZ1 680 aaPredicted RBP6.45□□□□□ -1.38
SYNE2-216ENST00000555002 DNAJB4Q9UDY4 337 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 NOCTQ9UK39 431 aaKnown RBP6.45□□□□□ -1.38
SYNE2-216ENST00000555002 ZNF732B4DXR9 585 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 OR7C1O76099 320 aaPredicted RBP6.45□□□□□ -1.38
SYNE2-216ENST00000555002 GOSR1O95249 250 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 PIGRP01833 764 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 HTR1EP28566 365 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 UBE2IP63279 158 aaKnown RBP6.45□□□□□ -1.38
SYNE2-216ENST00000555002 HBG1P69891 147 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 HBG2P69892 147 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 FGFBP1Q14512 234 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 MEF2DQ14814 521 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 CCDC71Q8IV32 467 aaPredicted RBP6.45□□□□□ -1.38
SYNE2-216ENST00000555002 OR5AS1Q8N127 324 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 C15orf54Q8N8G6 183 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 OR2T35Q8NGX2 323 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 MFFQ9GZY8 342 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 FAM124BQ9H5Z6 455 aaPredicted RBP6.45□□□□□ -1.38
SYNE2-216ENST00000555002 DUOX1Q9NRD9 1551 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 A0A0D9SG52 128 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 FAM166BA8MTA8 275 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 DDAH2O95865 285 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 TPOP07202 933 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 ARHGAP1Q07960 439 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 MEP1BQ16820 701 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 SUMF1Q8NBK3 374 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 SLC7A9P82251 487 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 ADIRFQ15847 76 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 LPCAT3Q6P1A2 487 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 LBX2Q6XYB7 198 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 SERINC5Q86VE9 423 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 TMEM139Q8IV31 216 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 OR9Q2Q8NGE9 314 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 PBX4Q9BYU1 374 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 A0A1W2PQL4 384 aaPredicted RBP6.45□□□□□ -1.38
SYNE2-216ENST00000555002 METAP1DQ6UB28 335 aaPredicted RBP6.45□□□□□ -1.38
SYNE2-216ENST00000555002 CAMKMTQ7Z624 323 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 PIGWQ7Z7B1 504 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 NAT8LQ8N9F0 302 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 PLPP5Q8NEB5 264 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 ST8SIA2Q92186 375 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 MCOLN1Q9GZU1 580 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 GALNT9Q9HCQ5 603 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 PIKFYVEQ9Y2I7 2098 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 H0YAE9 185 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 M0QZ24 198 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 WNT11O96014 354 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 AADACP22760 399 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 ALKBH6Q3KRA9 238 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 PHLDA2Q53GA4 152 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 SFT2D3Q587I9 215 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 ADGRG3Q86Y34 549 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 OR1S2Q8NGQ3 325 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 CPNE4Q96A23 557 aaPredicted RBP6.45□□□□□ -1.38
SYNE2-216ENST00000555002 TMEM19Q96HH6 336 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 GPR22Q99680 433 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 SELENOIQ9C0D9 397 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 METTL9Q9H1A3 318 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 PLSCR3Q9NRY6 295 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 SLC39A9Q9NUM3 307 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 LHX6Q9UPM6 363 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 CSNK1G3Q9Y6M4 447 aa6.45□□□□□ -1.38
SYNE2-216ENST00000555002 SCN8AQ9UQD0 1980 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 OR2M5A3KFT3 312 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 MEGF11A6BM72 1044 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 HPGDSO60760 199 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 PVRP15151 417 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 SLC1A3P43003 542 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 WDR4P57081 412 aaKnown RBP6.44□□□□□ -1.38
SYNE2-216ENST00000555002 CATR1Q13166 79 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 SPHARQ15513 63 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 ZNF74Q16587 644 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.44□□□□□ -1.38
SYNE2-216ENST00000555002 OR52R1Q8NGF1 315 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 OR5D14Q8NGL3 314 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 IGSF8Q969P0 613 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 SLC2A13Q96QE2 648 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 CMSS1Q9BQ75 279 aaKnown RBP6.44□□□□□ -1.38
SYNE2-216ENST00000555002 PELI2Q9HAT8 420 aa6.44□□□□□ -1.38
SYNE2-216ENST00000555002 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms