RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 OR2T1O43869 369 aa14.79□□□□□ -0.04
SPTLC2-203ENST00000554901 WDR1O75083 606 aa14.79□□□□□ -0.04
SPTLC2-203ENST00000554901 GADD45GO95257 159 aa14.79□□□□□ -0.04
SPTLC2-203ENST00000554901 PRB1P04280 392 aa14.79□□□□□ -0.04
SPTLC2-203ENST00000554901 SFTPDP35247 375 aa14.79□□□□□ -0.04
SPTLC2-203ENST00000554901 ERFP50548 548 aa14.79□□□□□ -0.04
SPTLC2-203ENST00000554901 CLDN20P56880 219 aa14.79□□□□□ -0.04
SPTLC2-203ENST00000554901 TLE1Q04724 770 aa14.79□□□□□ -0.04
SPTLC2-203ENST00000554901 GALNT11Q8NCW6 608 aa14.79□□□□□ -0.04
SPTLC2-203ENST00000554901 OR2V1Q8NHB1 315 aa14.79□□□□□ -0.04
SPTLC2-203ENST00000554901 ACOT11Q8WXI4 607 aaPredicted RBP14.79□□□□□ -0.04
SPTLC2-203ENST00000554901 SMPDL3BQ92485 455 aa14.79□□□□□ -0.04
SPTLC2-203ENST00000554901 ADGRG7Q96K78 797 aa14.79□□□□□ -0.04
SPTLC2-203ENST00000554901 KLHL4Q9C0H6 718 aa14.79□□□□□ -0.04
SPTLC2-203ENST00000554901 TMEM185BQ9H7F4 350 aa14.79□□□□□ -0.04
SPTLC2-203ENST00000554901 TIGARQ9NQ88 270 aa14.79□□□□□ -0.04
SPTLC2-203ENST00000554901 IGKV1D-42A0A075B6H8 117 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 TRAV36DV7A0A075B6V5 113 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 A0A0J9YW62 118 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 ANKRD65E5RJM6 399 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 EIF1AYO14602 144 aaKnown RBP14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 SLC19A2O60779 497 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 FZD7O75084 574 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 DEAF1O75398 565 aaPredicted RBP14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 DIRAS1O95057 198 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 AHSA1O95433 338 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 PMS2P2O95744 297 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 CST1P01037 141 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 TFPIP10646 304 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 CCNA2P20248 432 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 RRM2P31350 389 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 CSNK2A1P68400 391 aaPredicted RBP14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 SPIBQ01892 262 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 EGR4Q05215 589 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 MFSD13AQ14CX5 517 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 CTU2Q2VPK5 515 aaKnown RBP14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 GXYLT1Q4G148 440 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 C1orf140Q5VVS0 124 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 WDR88Q6ZMY6 472 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 TMPPEQ6ZT21 453 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 PRICKLE2Q7Z3G6 844 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 NKAIN4Q8IVV8 208 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 ATP6V1C2Q8NEY4 427 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 TMEM239Q8WW34 195 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 OR5B2Q96R09 309 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 OR11A1Q9GZK7 315 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 REEP1Q9H902 201 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 RHCGQ9UBD6 479 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 DNAJB9Q9UBS3 223 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 CAMK2AQ9UQM7 478 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 MED31Q9Y3C7 131 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 TESMINQ9Y4I5 508 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 SHANK1Q9Y566 2161 aa14.78□□□□□ -0.04
SPTLC2-203ENST00000554901 H0Y3Z8 333 aa14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 SEC14L5O43304 696 aa14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 ENTPD5O75356 428 aa14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 MT-ND1P03886 318 aa14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 IDUAP35475 653 aa14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 SUCLG1P53597 346 aaKnown RBP14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 CLDN15P56746 228 aa14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 RAC3P60763 192 aa14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 C19orf57Q0VDD7 668 aa14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 MYBPHQ13203 477 aa14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 FAM69AQ5T7M9 428 aa14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 HBMQ6B0K9 141 aa14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 CHMP1BQ7LBR1 199 aa14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 RRM2BQ7LG56 351 aa14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 UBQLNLQ8IYU4 475 aa14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 LINC00471Q8N535 108 aa14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 MFSD8Q8NHS3 518 aa14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 SLC7A13Q8TCU3 470 aa14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 STMN2Q93045 179 aa14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 CPNE4Q96A23 557 aaPredicted RBP14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 ARL5BQ96KC2 179 aa14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 UCN2Q96RP3 112 aa14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 FUZQ9BT04 418 aa14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 COQ10BQ9H8M1 238 aa14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 MED12Q93074 2177 aa14.77□□□□□ -0.04
SPTLC2-203ENST00000554901 A0A087WUU8 490 aa14.76□□□□□ -0.05
SPTLC2-203ENST00000554901 ZC3H12DA2A288 527 aaKnown RBP14.76□□□□□ -0.05
SPTLC2-203ENST00000554901 TNFSF11O14788 317 aa14.76□□□□□ -0.05
SPTLC2-203ENST00000554901 TPOP07202 933 aa14.76□□□□□ -0.05
SPTLC2-203ENST00000554901 FASP25445 335 aa14.76□□□□□ -0.05
SPTLC2-203ENST00000554901 SHC1P29353 583 aa14.76□□□□□ -0.05
SPTLC2-203ENST00000554901 LIMS1P48059 325 aa14.76□□□□□ -0.05
SPTLC2-203ENST00000554901 DIO1P49895 249 aa14.76□□□□□ -0.05
SPTLC2-203ENST00000554901 CARD18P57730 90 aa14.76□□□□□ -0.05
SPTLC2-203ENST00000554901 FGD3Q5JSP0 725 aa14.76□□□□□ -0.05
SPTLC2-203ENST00000554901 ADGRE4PQ86SQ3 457 aa14.76□□□□□ -0.05
SPTLC2-203ENST00000554901 ATCAYQ86WG3 371 aa14.76□□□□□ -0.05
SPTLC2-203ENST00000554901 OR10D3Q8NH80 312 aa14.76□□□□□ -0.05
SPTLC2-203ENST00000554901 TMEM255BQ8WV15 326 aa14.76□□□□□ -0.05
SPTLC2-203ENST00000554901 OSTF1Q92882 214 aa14.76□□□□□ -0.05
SPTLC2-203ENST00000554901 TP63Q9H3D4 680 aaPredicted RBP14.76□□□□□ -0.05
SPTLC2-203ENST00000554901 KRCC1Q9NPI7 259 aaPredicted RBP14.76□□□□□ -0.05
SPTLC2-203ENST00000554901 PNPLA3Q9NST1 481 aa14.76□□□□□ -0.05
SPTLC2-203ENST00000554901 TNFRSF10DQ9UBN6 386 aa14.76□□□□□ -0.05
SPTLC2-203ENST00000554901 TMCC3Q9ULS5 477 aa14.76□□□□□ -0.05
SPTLC2-203ENST00000554901 ZNF175Q9Y473 711 aa14.76□□□□□ -0.05
SPTLC2-203ENST00000554901 LYVE1Q9Y5Y7 322 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms