RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 PRAMEF17Q5VTA0 474 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 TMEM215Q68D42 235 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 NIPAL3Q6P499 406 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 LRFN4Q6PJG9 635 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 TMPRSS11FQ6ZWK6 438 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 TMEM17Q86X19 198 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 SIAH3Q8IW03 269 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 TMEM234Q8WY98 164 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 KLHDC7BQ96G42 594 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 ZNF471Q9BX82 626 aaPredicted RBP3.61□□□□□ -1.83
KTN1-217ENST00000554831 BARHL1Q9BZE3 327 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 CXXC1Q9P0U4 656 aaPredicted RBP3.61□□□□□ -1.83
KTN1-217ENST00000554831 MSRAQ9UJ68 235 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 NUP50Q9UKX7 468 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 MKL2Q9ULH7 1088 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 PSME4Q14997 1843 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 NPIPA5A0A0B4J1W7 369 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 ACOD1A6NK06 481 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 NPIPA7E9PJI5 369 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 GABARAPH6UMI1 98 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 SOX1O00570 391 aaPredicted RBP3.61□□□□□ -1.83
KTN1-217ENST00000554831 PHYHO14832 338 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 PRKRAO75569 313 aaKnown RBP3.61□□□□□ -1.83
KTN1-217ENST00000554831 RAB3DO95716 219 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 LALBAP00709 142 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 CTSLP07711 333 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 GIMD1P0DJR0 217 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 NPIPA8P0DM63 369 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 IFNGR1P15260 489 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 RFX2P48378 723 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 SOX9P48436 509 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 SEC13P55735 322 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 GRM7Q14831 915 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 OPCMLQ14982 345 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 ZNF750Q32MQ0 723 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 YIF1BQ5BJH7 314 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 ZNF628Q5EBL2 1059 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 MANEAQ5SRI9 462 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 FAM27D1Q5T7N8 215 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 MTFR2Q6P444 385 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 C19orf48Q6RUI8 117 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 TMEM205Q6UW68 189 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 BEST3Q8N1M1 668 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 OR5AK2Q8NH90 309 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 ZFPM2Q8WW38 1151 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 DAZLQ92904 295 aaKnown RBP3.61□□□□□ -1.83
KTN1-217ENST00000554831 NKD1Q969G9 470 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 MRGPRX3Q96LB0 322 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 PDCD1LG2Q9BQ51 273 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 B3GNT4Q9C0J1 378 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 NOX3Q9HBY0 568 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 FZD3Q9NPG1 666 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 NRIP3Q9NQ35 241 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 UBQLN4Q9NRR5 601 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 SPHK1Q9NYA1 384 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 MRPL15Q9P015 296 aaKnown RBP3.61□□□□□ -1.83
KTN1-217ENST00000554831 PLEKHB1Q9UF11 243 aaPredicted RBP3.61□□□□□ -1.83
KTN1-217ENST00000554831 DSPPQ9NZW4 1301 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 BRWD3Q6RI45 1802 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 PLXNA1Q9UIW2 1896 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 PAPPA2Q9BXP8 1791 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 CDHR4A6H8M9 788 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 GRXCR1A8MXD5 290 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 KDM4EB2RXH2 506 aaPredicted RBP3.61□□□□□ -1.83
KTN1-217ENST00000554831 KRBOX1C9JBD0 128 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 C1QCP02747 245 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 SLC35E2P0CK97 266 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 M6PRP20645 277 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 SLC6A1P30531 599 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 Q499Y3 187 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 GLYR1Q49A26 553 aaPredicted RBP3.61□□□□□ -1.83
KTN1-217ENST00000554831 CCDC58Q4VC31 144 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 TRMT12Q53H54 448 aaKnown RBP3.61□□□□□ -1.83
KTN1-217ENST00000554831 ALG10Q5BKT4 473 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 LIPNQ5VXI9 398 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 LYPD4Q6UWN0 246 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 MAMDC2Q7Z304 686 aaPredicted RBP3.61□□□□□ -1.83
KTN1-217ENST00000554831 TSEN54Q7Z6J9 526 aaKnown RBP3.61□□□□□ -1.83
KTN1-217ENST00000554831 ZNF101Q8IZC7 436 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 FBXL6Q8N531 539 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 LRFN5Q96NI6 719 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 ASB16Q96NS5 453 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 SCGB3A2Q96PL1 93 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 STACQ99469 402 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 ALG12Q9BV10 488 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 ZNF436Q9C0F3 470 aaPredicted RBP3.61□□□□□ -1.83
KTN1-217ENST00000554831 CERS4Q9HA82 394 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 PDE7BQ9NP56 450 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 MEPEQ9NQ76 525 aaPredicted RBP3.61□□□□□ -1.83
KTN1-217ENST00000554831 SLC2A4RGQ9NR83 387 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 POT1Q9NUX5 634 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 TAS2R3Q9NYW6 316 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 PCDH10Q9P2E7 1040 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 KCNN3Q9UGI6 736 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 TMEM72A0PK05 275 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 PRAMEF25A6NGN4 478 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 OR2AT4A6NND4 320 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 TNFRSF10CO14798 259 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 SURF4O15260 269 aa3.61□□□□□ -1.83
KTN1-217ENST00000554831 SSX4O60224 188 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms