RNA–Protein interactions for RNA: ENST00000554774.1

XRCC3-207, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-207ENST00000554774 ELOA3DA6NLF2 546 aaPredicted RBP12.3□□□□□ -0.44
XRCC3-207ENST00000554774 CLDN24A6NM45 220 aa12.3□□□□□ -0.44
XRCC3-207ENST00000554774 DNPH1O43598 174 aa12.3□□□□□ -0.44
XRCC3-207ENST00000554774 GUSBP08236 651 aa12.3□□□□□ -0.44
XRCC3-207ENST00000554774 ITGA5P08648 1049 aa12.3□□□□□ -0.44
XRCC3-207ENST00000554774 NUDT17P0C025 328 aa12.3□□□□□ -0.44
XRCC3-207ENST00000554774 FAM157CP0CG43 387 aa12.3□□□□□ -0.44
XRCC3-207ENST00000554774 CHI3L1P36222 383 aaPredicted RBP12.3□□□□□ -0.44
XRCC3-207ENST00000554774 IDH2P48735 452 aaKnown RBP12.3□□□□□ -0.44
XRCC3-207ENST00000554774 CLK1P49759 484 aaKnown RBP12.3□□□□□ -0.44
XRCC3-207ENST00000554774 KHKP50053 298 aa12.3□□□□□ -0.44
XRCC3-207ENST00000554774 KCNJ10P78508 379 aa12.3□□□□□ -0.44
XRCC3-207ENST00000554774 LOXL1Q08397 574 aaPredicted RBP12.3□□□□□ -0.44
XRCC3-207ENST00000554774 FUT5Q11128 374 aa12.3□□□□□ -0.44
XRCC3-207ENST00000554774 ELOA3BQ3SY89 546 aa12.3□□□□□ -0.44
XRCC3-207ENST00000554774 ANXA8L1Q5VT79 327 aa12.3□□□□□ -0.44
XRCC3-207ENST00000554774 SAXO2Q658L1 398 aa12.3□□□□□ -0.44
XRCC3-207ENST00000554774 ZNF544Q6NX49 715 aa12.3□□□□□ -0.44
XRCC3-207ENST00000554774 LSRQ86X29 649 aaPredicted RBP12.3□□□□□ -0.44
XRCC3-207ENST00000554774 NUDCD3Q8IVD9 361 aa12.3□□□□□ -0.44
XRCC3-207ENST00000554774 VPS37AQ8NEZ2 397 aa12.3□□□□□ -0.44
XRCC3-207ENST00000554774 ELOA3Q8NG57 546 aa12.3□□□□□ -0.44
XRCC3-207ENST00000554774 FAM168AQ92567 244 aa12.3□□□□□ -0.44
XRCC3-207ENST00000554774 SAP130Q9H0E3 1048 aa12.3□□□□□ -0.44
XRCC3-207ENST00000554774 EXOSC3Q9NQT5 275 aaKnown RBP12.3□□□□□ -0.44
XRCC3-207ENST00000554774 CDC42EP3Q9UKI2 254 aa12.3□□□□□ -0.44
XRCC3-207ENST00000554774 TMED7Q9Y3B3 224 aa12.3□□□□□ -0.44
XRCC3-207ENST00000554774 PRSS51A0A1B0GVH4 220 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 TMEM72A0PK05 275 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 WDR91A4D1P6 747 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 H7C417 338 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 AP3D1O14617 1153 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 PHF1O43189 567 aaPredicted RBP12.29□□□□□ -0.44
XRCC3-207ENST00000554774 ITM2AO43736 263 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 EIF1BO60739 113 aaKnown RBP12.29□□□□□ -0.44
XRCC3-207ENST00000554774 SCN2BO60939 215 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 BMP4P12644 408 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 HTR3AP46098 478 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 SLC35A1P78382 337 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 VLDLRP98155 873 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 CHRNB3Q05901 458 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 ZNF781Q8N8C0 355 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 WDR31Q8NA23 367 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 NANOS1Q8WY41 292 aaKnown RBP12.29□□□□□ -0.44
XRCC3-207ENST00000554774 CNOT9Q92600 299 aaKnown RBP12.29□□□□□ -0.44
XRCC3-207ENST00000554774 DDIT4LQ96D03 193 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 NEURL3Q96EH8 262 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 PKNOX2Q96KN3 472 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 ZIM3Q96PE6 472 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 SLC35A5Q9BS91 424 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 NAA11Q9BSU3 229 aaPredicted RBP12.29□□□□□ -0.44
XRCC3-207ENST00000554774 BEX2Q9BXY8 128 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 FKRPQ9H9S5 495 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 SLC17A5Q9NRA2 495 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 PARPBPQ9NWS1 579 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 MARCOQ9UEW3 520 aaPredicted RBP12.29□□□□□ -0.44
XRCC3-207ENST00000554774 DCTN4Q9UJW0 460 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 TRAPPC4Q9Y296 219 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 SLC9A8Q9Y2E8 581 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 AMDHD2Q9Y303 409 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 FLVCR1Q9Y5Y0 555 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 PMF1-BGLAPU3KQ54 211 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 ANK2Q01484 3957 aa12.29□□□□□ -0.44
XRCC3-207ENST00000554774 PRAMEF27A3QJZ7 478 aa12.28□□□□□ -0.44
XRCC3-207ENST00000554774 PDLIM1O00151 329 aa12.28□□□□□ -0.44
XRCC3-207ENST00000554774 IMPDH2P12268 514 aa12.28□□□□□ -0.44
XRCC3-207ENST00000554774 APOBEC3AP31941 199 aaPredicted RBP12.28□□□□□ -0.44
XRCC3-207ENST00000554774 ETV4P43268 484 aa12.28□□□□□ -0.44
XRCC3-207ENST00000554774 POLR2HP52434 150 aaKnown RBP12.28□□□□□ -0.44
XRCC3-207ENST00000554774 PHC1P78364 1004 aa12.28□□□□□ -0.44
XRCC3-207ENST00000554774 H3F3AP84243 136 aa12.28□□□□□ -0.44
XRCC3-207ENST00000554774 SLC25A3Q00325 362 aa12.28□□□□□ -0.44
XRCC3-207ENST00000554774 PLAURQ03405 335 aa12.28□□□□□ -0.44
XRCC3-207ENST00000554774 TSPO2Q5TGU0 170 aa12.28□□□□□ -0.44
XRCC3-207ENST00000554774 CYB5R2Q6BCY4 276 aa12.28□□□□□ -0.44
XRCC3-207ENST00000554774 C17orf78Q8N4C9 275 aa12.28□□□□□ -0.44
XRCC3-207ENST00000554774 C10orf105Q8TEF2 133 aa12.28□□□□□ -0.44
XRCC3-207ENST00000554774 PMM1Q92871 262 aa12.28□□□□□ -0.44
XRCC3-207ENST00000554774 ROPN1BQ9BZX4 212 aaPredicted RBP12.28□□□□□ -0.44
XRCC3-207ENST00000554774 ROPN1Q9HAT0 212 aaPredicted RBP12.28□□□□□ -0.44
XRCC3-207ENST00000554774 SLC7A10Q9NS82 523 aa12.28□□□□□ -0.44
XRCC3-207ENST00000554774 OSGIN1Q9UJX0 560 aa12.28□□□□□ -0.44
XRCC3-207ENST00000554774 SVEP1Q4LDE5 3571 aa12.27□□□□□ -0.44
XRCC3-207ENST00000554774 ATP6V1G2-DDX39BF2Z307 99 aa12.27□□□□□ -0.45
XRCC3-207ENST00000554774 HMGN4O00479 90 aa12.27□□□□□ -0.45
XRCC3-207ENST00000554774 ZNF208O43345 1280 aa12.27□□□□□ -0.45
XRCC3-207ENST00000554774 TYROBPO43914 113 aa12.27□□□□□ -0.45
XRCC3-207ENST00000554774 LY6HO94772 140 aa12.27□□□□□ -0.45
XRCC3-207ENST00000554774 CSF3P09919 207 aa12.27□□□□□ -0.45
XRCC3-207ENST00000554774 MYZAPP0CAP1 466 aa12.27□□□□□ -0.45
XRCC3-207ENST00000554774 IGHV4-31P0DP07 118 aa12.27□□□□□ -0.45
XRCC3-207ENST00000554774 ZNF16P17020 682 aaPredicted RBP12.27□□□□□ -0.45
XRCC3-207ENST00000554774 TACR3P29371 465 aa12.27□□□□□ -0.45
XRCC3-207ENST00000554774 EFNA4P52798 201 aa12.27□□□□□ -0.45
XRCC3-207ENST00000554774 ABCE1P61221 599 aaKnown RBP12.27□□□□□ -0.45
XRCC3-207ENST00000554774 TGFBR3Q03167 851 aa12.27□□□□□ -0.45
XRCC3-207ENST00000554774 CASP8Q14790 479 aa12.27□□□□□ -0.45
XRCC3-207ENST00000554774 CHI3L2Q15782 390 aa12.27□□□□□ -0.45
XRCC3-207ENST00000554774 SYPL1Q16563 259 aa12.27□□□□□ -0.45
XRCC3-207ENST00000554774 SPANXN4Q5MJ08 99 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms