RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 EIF5AP63241 154 aaKnown RBP3.09□□□□□ -1.91
SYNE2-212ENST00000554584 DHRS4L2Q6PKH6 230 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 PLXDC2Q6UX71 529 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 SLC38A5Q8WUX1 472 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 GIMAP1Q8WWP7 306 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF516Q92618 1163 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 FKBP10Q96AY3 582 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 CXorf58Q96LI9 332 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 DPH1Q9BZG8 443 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 CERS1P27544 350 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 ILF2Q12905 390 aaKnown RBP3.09□□□□□ -1.91
SYNE2-212ENST00000554584 TRAM2Q15035 370 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 ECSCRQ19T08 205 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 Q56UQ5 140 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 COL13A1Q5TAT6 717 aaPredicted RBP3.09□□□□□ -1.91
SYNE2-212ENST00000554584 SLC39A5Q6ZMH5 540 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 ZDHHC17Q8IUH5 632 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 SLC44A3Q8N4M1 653 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 GBF1Q92538 1859 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 ANK1P16157 1881 aa3.09□□□□□ -1.91
SYNE2-212ENST00000554584 FBXO24O75426 580 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 ZNF888P0CJ79 500 aaPredicted RBP3.09□□□□□ -1.92
SYNE2-212ENST00000554584 HTR2BP41595 481 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 MVKQ03426 396 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 ARHGAP1Q07960 439 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 C1orf53Q5VUE5 145 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 Q6ZS52 159 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 IGDCC3Q8IVU1 814 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 KLHL36Q8N4N3 616 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 AGBL5Q8NDL9 886 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 BLNKQ8WV28 456 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.09□□□□□ -1.92
SYNE2-212ENST00000554584 ADAMTS14Q8WXS8 1223 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 C11orf68Q9H3H3 251 aaKnown RBP3.09□□□□□ -1.92
SYNE2-212ENST00000554584 PARP11Q9NR21 331 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 TAS2R9Q9NYW1 312 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 CMAHPQ9Y471 501 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 PHYHO14832 338 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 EBLN1P0CF75 366 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 HOXD12P35452 270 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 C20orf196Q8IYI0 205 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 CAMKVQ8NCB2 501 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 TFGQ92734 400 aaPredicted RBP3.09□□□□□ -1.92
SYNE2-212ENST00000554584 SGK3Q96BR1 496 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 SPAG8Q99932 426 aaPredicted RBP3.09□□□□□ -1.92
SYNE2-212ENST00000554584 OR2J1Q9GZK6 312 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 TCEAL2Q9H3H9 227 aaPredicted RBP3.09□□□□□ -1.92
SYNE2-212ENST00000554584 IL17BQ9UHF5 180 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 PRPF19Q9UMS4 504 aaKnown RBP3.09□□□□□ -1.92
SYNE2-212ENST00000554584 PROB1E7EW31 1015 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 H0Y8X5 98 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 POLR1CO15160 346 aaPredicted RBP3.09□□□□□ -1.92
SYNE2-212ENST00000554584 LIASO43766 372 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 CSN3P07498 182 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 RPL13AP40429 203 aaKnown RBP3.09□□□□□ -1.92
SYNE2-212ENST00000554584 CDKN2CP42773 168 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 HTR6P50406 440 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 HHEXQ03014 270 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 ALKBH1Q13686 389 aaKnown RBP3.09□□□□□ -1.92
SYNE2-212ENST00000554584 C21orf62-AS1Q17RA5 79 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 ABHD4Q8TB40 342 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 UBE2FQ969M7 185 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 ORAI1Q96D31 301 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 PSD2Q9BQI7 771 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 PBX4Q9BYU1 374 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 PLEKHJ1Q9NW61 149 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 CCL26Q9Y258 94 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 ZNF716A6NP11 495 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 MITFO75030 526 aaPredicted RBP3.09□□□□□ -1.92
SYNE2-212ENST00000554584 H1F0P07305 194 aaKnown RBP3.09□□□□□ -1.92
SYNE2-212ENST00000554584 TPPP2P59282 170 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 INCA1Q0VD86 236 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 LSAMPQ13449 338 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 PHLDA2Q53GA4 152 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 CEACAM20Q6UY09 585 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 SVOPLQ8N434 492 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 AQP11Q8NBQ7 271 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 CLEC1AQ8NC01 280 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 FAM83FQ8NEG4 500 aaPredicted RBP3.09□□□□□ -1.92
SYNE2-212ENST00000554584 OR1M1Q8NGA1 313 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 C7orf43Q8WVR3 580 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 FCAMRQ8WWV6 532 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 MOB3AQ96BX8 217 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 SMIM12Q96EX1 92 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 SCGB3A2Q96PL1 93 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 EFCAB11Q9BUY7 163 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 CACNG6Q9BXT2 260 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 HSD3B7Q9H2F3 369 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 TAS2R8Q9NYW2 309 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 A8MVM7 634 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 C2P06681 752 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 KITLGP21583 273 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 OR3A4PP47883 348 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 RPL23AP62750 156 aaKnown RBP3.09□□□□□ -1.92
SYNE2-212ENST00000554584 SFT2D3Q587I9 215 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 CNIH3Q8TBE1 160 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 S1PR3Q99500 378 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 SLC30A2Q9BRI3 323 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 Q9N2J8 555 aa3.09□□□□□ -1.92
SYNE2-212ENST00000554584 TAS2R10Q9NYW0 307 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms