RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 FLRT3Q9NZU0 649 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 ACTR3BQ9P1U1 418 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 SLC7A8Q9UHI5 535 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 NDRG4Q9ULP0 352 aaKnown RBP5.74□□□□□ -1.49
SCFD1-212ENST00000554486 POMPQ9Y244 141 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 ANGPT4Q9Y264 503 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 YARS2Q9Y2Z4 477 aaKnown RBP5.74□□□□□ -1.49
SCFD1-212ENST00000554486 WDR45Q9Y484 360 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 PIEZO2Q9H5I5 2752 aa5.74□□□□□ -1.49
SCFD1-212ENST00000554486 PRRC2CQ9Y520 2896 aaKnown RBP5.73□□□□□ -1.49
SCFD1-212ENST00000554486 A0A0G2JPF8 293 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 TMEM8BA6NDV4 472 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 TMEM247A6NEH6 219 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 CFAP73A6NFT4 308 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 OR6C70A6NIJ9 312 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 HNRNPCL2B2RXH8 293 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 HNRNPCL3B7ZW38 293 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 C5orf58C9J3I9 102 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 M0QX08 132 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 ADAM10O14672 748 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 ICOSLGO75144 302 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 UGT2B11O75310 529 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 UGT2B17O75795 530 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 MFN2O95140 757 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 UTS2O95399 124 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 ALPPP05187 535 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 ANXA2P07355 339 aaKnown RBP5.73□□□□□ -1.49
SCFD1-212ENST00000554486 FREM3P0C091 2139 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 HNRNPCL4P0DMR1 293 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 CYP4B1P13584 511 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 ETS2P15036 469 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 NAGAP17050 411 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 ATP6V1C1P21283 382 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 IL12BP29460 328 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 LCN1P31025 176 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 RFX3P48380 749 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 SSR4P51571 173 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 CRISP3P54108 245 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 PNLIPRP2P54317 469 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 POLE2P56282 527 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 TMPRSS3P57727 454 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 FBXW4P57775 412 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 PSPHP78330 225 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 DMTNQ08495 405 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 TRAP1Q12931 704 aaKnown RBP5.73□□□□□ -1.49
SCFD1-212ENST00000554486 RAPSNQ13702 412 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 GNA13Q14344 377 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 GPR68Q15743 365 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 ZNF141Q15928 474 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 NTRK2Q16620 822 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 MEP1AQ16819 746 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 GRAMD1BQ3KR37 738 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 KLHL26Q53HC5 615 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 INTS11Q5TA45 600 aaKnown RBP5.73□□□□□ -1.49
SCFD1-212ENST00000554486 ABHD17BQ5VST6 288 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 GLYATQ6IB77 296 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 LCN8Q6JVE9 175 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 APOOLQ6UXV4 268 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 Q6YL49 198 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 HMGN2P46Q86SG4 172 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 PATL1Q86TB9 770 aaKnown RBP5.73□□□□□ -1.49
SCFD1-212ENST00000554486 COMTD1Q86VU5 262 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 TAGAPQ8N103 731 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 ZNF619Q8N2I2 560 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 FDCSPQ8NFU4 85 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 TNIP2Q8NFZ5 429 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 GPR32P1Q8NGA4 272 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 OR10G3Q8NGC4 313 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 OR4C3Q8NH37 302 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 BBS10Q8TAM1 723 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 SLC22A8Q8TCC7 542 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 RNF138Q8WVD3 245 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 SNRNP27Q8WVK2 155 aaKnown RBP5.73□□□□□ -1.49
SCFD1-212ENST00000554486 WDR60Q8WVS4 1066 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 APOBEC4Q8WW27 367 aaKnown RBP5.73□□□□□ -1.49
SCFD1-212ENST00000554486 LINC00476Q8WZB0 136 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 HGDQ93099 445 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 TAMM41Q96BW9 452 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 NTNG2Q96CW9 530 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 ASB9Q96DX5 294 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 SPACA9Q96E40 222 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-212ENST00000554486 ZNF354BQ96LW1 612 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 COL21A1Q96P44 957 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 MOGAT1Q96PD6 335 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 RAB3IPQ96QF0 476 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-212ENST00000554486 NODALQ96S42 347 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 RTN4RQ9BZR6 473 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 MUC13Q9H3R2 512 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 GORASP2Q9H8Y8 452 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 MTHFD2LQ9H903 347 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-212ENST00000554486 ZBTB20Q9HC78 741 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-212ENST00000554486 SH2D2AQ9NP31 389 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 GPR83Q9NYM4 423 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 CALML5Q9NZT1 146 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 MKLN1Q9UL63 735 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 ITPR1Q14643 2758 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 PKD1L2Q7Z442 2459 aa5.73□□□□□ -1.49
SCFD1-212ENST00000554486 NBEAQ8NFP9 2946 aa5.72□□□□□ -1.49
SCFD1-212ENST00000554486 AGAP5A6NIR3 686 aa5.72□□□□□ -1.49
SCFD1-212ENST00000554486 CLDN24A6NM45 220 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms