RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 MAS1LP35410 378 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 CFHR2P36980 270 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 COILP38432 576 aaPredicted RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 MAGEA6P43360 314 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 MAP2K4P45985 399 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 RPL21P46778 160 aaKnown RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 GNPDA1P46926 289 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 CLDN6P56747 220 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ERVS71-1P61550 626 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 DEFA6Q01524 100 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 PUDPQ08623 228 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 DBPQ10586 325 aaPredicted RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 KCNJ8Q15842 424 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 TIGD2Q4W5G0 525 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 XKR6Q5GH73 641 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 WASHC2DQ5SRD0 308 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 SEL1L3Q68CR1 1132 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 FCRL6Q6DN72 434 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 OR52W1Q6IF63 320 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ZFP1Q6P2D0 407 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 SIGLEC15Q6ZMC9 328 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF836Q6ZNA1 936 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 DPY19L3Q6ZPD9 716 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ESPNLQ6ZVH7 1005 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 THOC6Q86W42 341 aaKnown RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 KMT5CQ86Y97 462 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ENTHD1Q8IYW4 607 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 LRRC75A-AS1Q8N1F1 130 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF561Q8N587 486 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 HORMAD2Q8N7B1 307 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 AMER3Q8N944 861 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 OR4D9Q8NGE8 314 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 OR4A16Q8NH70 328 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ERGIC1Q969X5 290 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 CPNE4Q96A23 557 aaPredicted RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 SPSB1Q96BD6 273 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 CCDC124Q96CT7 223 aaKnown RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 TM4SF19Q96DZ7 209 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 RAX2Q96IS3 184 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 TMEM79Q9BSE2 394 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 RBM24Q9BX46 236 aaKnown RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 CCDC134Q9H6E4 229 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 DDX31Q9H8H2 851 aaKnown RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ZFYVE1Q9HBF4 777 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 PDFQ9HBH1 243 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 PLGRKTQ9HBL7 147 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 SIX2Q9NPC8 291 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 DYRK4Q9NR20 520 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 GFOD1Q9NXC2 390 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 ZNF282Q9UDV7 671 aaPredicted RBP2.49□□□□□ -2.01
PRPF39-206ENST00000554429 KCNG2Q9UJ96 466 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 IKZF3Q9UKT9 509 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 GSTK1Q9Y2Q3 226 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 PRELID3BQ9Y3B1 194 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 KCTD3Q9Y597 815 aa2.49□□□□□ -2.01
PRPF39-206ENST00000554429 CFAP47Q6ZTR5 3102 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 CFAP46Q8IYW2 2715 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 DSPP15924 2871 aaKnown RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 KIF26BQ2KJY2 2108 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 A0A1W2PPQ1 181 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 MGAT4DA6NG13 374 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 CCDC160A6NGH7 325 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 C5orf52A6NGY3 159 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 CBY3A6NI87 242 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 I6L893 689 aaPredicted RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 F2RL2O00254 374 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 YY2O15391 372 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 SGCEO43556 437 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 RGS10O43665 173 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 CST8O60676 142 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 OR7A10O76100 309 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 HAUS5O94927 633 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 NKX2-2O95096 273 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 RCBTB2O95199 551 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 VIPP01282 170 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 CRYABP02511 175 aaKnown RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 RAF1P04049 648 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 LYNP07948 512 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 RHOCP08134 193 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 UBCP0CG48 685 aaKnown RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 CD8BP10966 210 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 CHRNB2P17787 502 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 NPR2P20594 1047 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 OGNP20774 298 aaKnown RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 BGNP21810 368 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 CXCR2P25025 360 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 CHI3L1P36222 383 aaPredicted RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 GPR12P47775 334 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 HTR6P50406 440 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 PLA2G16P53816 162 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 SNRPD1P62314 119 aaKnown RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 HERVK_113P63132 956 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 ERVK-25P63136 954 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 CCL7P80098 99 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 GNA12Q03113 381 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 CHRNB3Q05901 458 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 LSAMPQ13449 338 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 ATP6AP1Q15904 470 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 PPP1R3AQ16821 1122 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 ANKRD55Q3KP44 614 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms