RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 CLIC1O00299 241 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 FAAHO00519 579 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 ACOT8O14734 319 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 THBS1P07996 1170 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 POU2F1P14859 743 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 FKBP2P26885 142 aaKnown RBP11.67□□□□□ -0.54
SHMT2-211ENST00000554310 AGTR1P30556 359 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 RYKP34925 604 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 APOBEC1P41238 236 aaKnown RBP11.67□□□□□ -0.54
SHMT2-211ENST00000554310 RAC3P60763 192 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 RGNQ15493 299 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 TAF11Q15544 211 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 ZSWIM7Q19AV6 140 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 SYT14P1Q58G82 188 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 MRPL2Q5T653 305 aaKnown RBP11.67□□□□□ -0.54
SHMT2-211ENST00000554310 RNF220Q5VTB9 566 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 ZNF474Q6S9Z5 364 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-211ENST00000554310 FCRLAQ7L513 359 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 DHDDSQ86SQ9 333 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 RETREG3Q86VR2 466 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 ZNF440Q8IYI8 595 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 SLC43A2Q8N370 569 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 ATP6V1C2Q8NEY4 427 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 ABHD3Q8WU67 409 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 CNOT9Q92600 299 aaKnown RBP11.67□□□□□ -0.54
SHMT2-211ENST00000554310 OR5B2Q96R09 309 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 POLDIP3Q9BY77 421 aaKnown RBP11.67□□□□□ -0.54
SHMT2-211ENST00000554310 CLEC4MQ9H2X3 399 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-211ENST00000554310 A4GALTQ9NPC4 353 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 FANCFQ9NPI8 374 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 RASSF1Q9NS23 344 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 SLC25A37Q9NYZ2 338 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 ADA2Q9NZK5 511 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 KLHL13Q9P2N7 655 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 ABCD2Q9UBJ2 740 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 CHRNA9Q9UGM1 479 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 CD300AQ9UGN4 299 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 CLEC4AQ9UMR7 237 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 CORO2BQ9UQ03 480 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 TESMINQ9Y4I5 508 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 GMEB1Q9Y692 573 aa11.67□□□□□ -0.54
SHMT2-211ENST00000554310 TRBV5-3A0A0A0MS03 114 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 A0A0G2JPF8 293 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 CDHR4A6H8M9 788 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 HNRNPCL2B2RXH8 293 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 HNRNPCL3B7ZW38 293 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 H3BNX3 289 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 NPPAP01160 153 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 HNRNPCL4P0DMR1 293 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 ACADSP16219 412 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 CCKARP32238 428 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 UGT2B10P36537 528 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 KCNJ5P48544 419 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 CSNK2A1P68400 391 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-211ENST00000554310 MS4A2Q01362 244 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 TRIM25Q14258 630 aaKnown RBP11.66□□□□□ -0.54
SHMT2-211ENST00000554310 LARS2Q15031 903 aaKnown RBP11.66□□□□□ -0.54
SHMT2-211ENST00000554310 RPS26P11Q5JNZ5 115 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-211ENST00000554310 ZNF836Q6ZNA1 936 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 STK32CQ86UX6 486 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 MSRB3Q8IXL7 192 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 OR52P1PQ8NH57 321 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 BBS10Q8TAM1 723 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 LINC01560Q8TB33 94 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 PYDC1Q8WXC3 89 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 DNAJC9Q8WXX5 260 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 ROBO4Q8WZ75 1007 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 RSRC1Q96IZ7 334 aaKnown RBP11.66□□□□□ -0.54
SHMT2-211ENST00000554310 ARMC7Q9H6L4 198 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 BCL2L10Q9HD36 194 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 PLSCR4Q9NRQ2 329 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 NDRG3Q9UGV2 375 aa11.66□□□□□ -0.54
SHMT2-211ENST00000554310 LEF1Q9UJU2 399 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-211ENST00000554310 ZNF443Q9Y2A4 671 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-211ENST00000554310 A0A1W2PNR3 127 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 C5orf58C9J3I9 102 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 C16orf97H3BN30 126 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 FXYD1O00168 92 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 AP3D1O14617 1153 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 CASQ2O14958 399 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-211ENST00000554310 DNPH1O43598 174 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 ADAM11O75078 769 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 PRKD3O94806 890 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 BAG2O95816 211 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 NUDT7P0C024 238 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 IDH2P48735 452 aaKnown RBP11.65□□□□□ -0.54
SHMT2-211ENST00000554310 CLK1P49759 484 aaKnown RBP11.65□□□□□ -0.54
SHMT2-211ENST00000554310 DIO1P49895 249 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 POLR2HP52434 150 aaKnown RBP11.65□□□□□ -0.54
SHMT2-211ENST00000554310 MAP2K6P52564 334 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 FAM27E3Q08E93 113 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 EPS8Q12929 822 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 PAGE3Q5JUK9 113 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 TMEM201Q5SNT2 666 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 GCNT6Q5T4J0 391 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 VRK2Q86Y07 508 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 ZNF610Q8N9Z0 462 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 BHLHE22Q8NFJ8 381 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-211ENST00000554310 LRRC58Q96CX6 371 aa11.65□□□□□ -0.54
SHMT2-211ENST00000554310 DUS3LQ96G46 650 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms