RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 CSF2RBP32927 897 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 SRP9P49458 86 aaKnown RBP13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 EMDP50402 254 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 FAM27D1Q5T7N8 215 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 PLXDC1Q8IUK5 500 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 ZNF595Q8IYB9 648 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 MAFAQ8NHW3 353 aaPredicted RBP13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 TTC9Q92623 222 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 DIO2Q92813 273 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 OTULINQ96BN8 352 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 DHRS9Q9BPW9 319 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 ERVK-19Q9WJR5 959 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 NCOR1O75376 2440 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 TMEM131Q92545 1883 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 ZC3H12DA2A288 527 aaKnown RBP13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 CPED1A4D0V7 1026 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 FAM183AA6NL82 134 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 THY1P04216 161 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 EIF4EP06730 217 aaKnown RBP13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 EPHA4P54764 986 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 RNASE12Q5GAN4 147 aaKnown RBP13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 METAP1DQ6UB28 335 aaPredicted RBP13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 PRSS58Q8IYP2 241 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 OR11H7Q8NGC8 314 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 OR11H4Q8NGC9 324 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 OR6C4Q8NGE1 309 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 TMEM255BQ8WV15 326 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 CCDC120Q96HB5 630 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 ZNF285Q96NJ3 590 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 PTCHD1Q96NR3 888 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 SECISBP2Q96T21 854 aaKnown RBP13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 STACQ99469 402 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 NUDT22Q9BRQ3 303 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 CUTCQ9NTM9 273 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 SLC7A7Q9UM01 511 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 CLDN16Q9Y5I7 305 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 FREM2Q5SZK8 3169 aa13.49□□□□□ -0.25
PPP4R3A-201ENST00000554308 SYNDIG1LA6NDD5 238 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 A8MUA0 341 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 SOCS6O14544 535 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 SLC6A1P30531 599 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 EEF1A1P68104 462 aaKnown RBP13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 TRAM2Q15035 370 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 SHBQ15464 509 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 ZNHIT3Q15649 155 aaPredicted RBP13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 GARNL3Q5VVW2 1013 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 GDF7Q7Z4P5 450 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 HSD17B8Q92506 261 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 SLC41A3Q96GZ6 507 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 ISYNA1Q9NPH2 558 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 ATXN7L1Q9ULK2 861 aaPredicted RBP13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 CSNK1G3Q9Y6M4 447 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 C19orf67A6NJJ6 358 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 HLA-DPB1P04440 258 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 DBIP07108 87 aaKnown RBP13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 NID1P14543 1247 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 BTCP35070 178 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 GPR4P46093 362 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 OR10A3P58181 314 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 PLA1AQ53H76 456 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 ZBTB37Q5TC79 503 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 C1orf189Q5VU69 101 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 ZCCHC12Q6PEW1 402 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 GLRX5Q86SX6 157 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 SIRT6Q8N6T7 355 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 PIGKQ92643 395 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 CREB3L1Q96BA8 519 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 MS4A3Q96HJ5 214 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 HYLS1Q96M11 299 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 TBX5Q99593 518 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 SMAD5Q99717 465 aaKnown RBP13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 FOLH1BQ9HBA9 442 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 ZFP64Q9NPA5 681 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 ZNF222Q9UK12 451 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 MGAT4AQ9UM21 535 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 SATB2Q9UPW6 733 aa13.48□□□□□ -0.25
PPP4R3A-201ENST00000554308 CIB4A0PJX0 185 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 EEF1E1O43324 174 aaKnown RBP13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 HYAL3O43820 417 aaPredicted RBP13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 BRINP1O60477 761 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 CXCL3P19876 107 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 TBXA2RP21731 343 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 MAP3K8P41279 467 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 PER3P56645 1201 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 AADACL4Q5VUY2 407 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 NRMQ8IXM6 262 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 GPR135Q8IZ08 494 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 OR8H3Q8N146 312 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 GHDCQ8N2G8 530 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 POGLUT1Q8NBL1 392 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 RCBTB1Q8NDN9 531 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 OR1L3Q8NH93 324 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 DNAJA4Q8WW22 397 aaPredicted RBP13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 SLC38A2Q96QD8 506 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 CD180Q99467 661 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 THAP7Q9BT49 309 aaPredicted RBP13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 RAB33BQ9H082 229 aa13.47□□□□□ -0.25
PPP4R3A-201ENST00000554308 ABCG5Q9H222 651 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms