RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 PTGES2Q9H7Z7 377 aa6.91□□□□□ -1.3
ABCD4-220ENST00000553998 GALNT9Q9HCQ5 603 aa6.91□□□□□ -1.3
ABCD4-220ENST00000553998 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.91□□□□□ -1.3
ABCD4-220ENST00000553998 CMTM6Q9NX76 183 aa6.91□□□□□ -1.3
ABCD4-220ENST00000553998 FLRT3Q9NZU0 649 aa6.91□□□□□ -1.3
ABCD4-220ENST00000553998 PPP4R1LQ9P1A2 415 aa6.91□□□□□ -1.3
ABCD4-220ENST00000553998 TMEM181Q9P2C4 612 aa6.91□□□□□ -1.3
ABCD4-220ENST00000553998 KCNE5Q9UJ90 142 aa6.91□□□□□ -1.3
ABCD4-220ENST00000553998 SLC35A3Q9Y2D2 325 aa6.91□□□□□ -1.3
ABCD4-220ENST00000553998 RAI1Q7Z5J4 1906 aaPredicted RBP6.91□□□□□ -1.3
ABCD4-220ENST00000553998 CHD3Q12873 2000 aaKnown RBP6.91□□□□□ -1.3
ABCD4-220ENST00000553998 HEATR5AQ86XA9 2040 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 NPIPA5A0A0B4J1W7 369 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 ELOVL7A1L3X0 281 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 A8MV72 311 aaPredicted RBP6.9□□□□□ -1.3
ABCD4-220ENST00000553998 B2RBV5 119 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 NPIPA7E9PJI5 369 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 GTPBP1O00178 669 aaKnown RBP6.9□□□□□ -1.3
ABCD4-220ENST00000553998 ZIC3O60481 467 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 SERPINB7O75635 380 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 SMNDC1O75940 238 aaKnown RBP eCLIP6.9□□□□□ -1.3
ABCD4-220ENST00000553998 ATP5HO75947 161 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 UBOX5O94941 541 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 CSTAP01040 98 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 IFNA14P01570 189 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 DANCRP0C864 163 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 NPIPA8P0DM63 369 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 UBL4AP11441 157 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 IL7RP16871 459 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 IL11P20809 199 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 PRKAR1BP31321 381 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 CLDN15P56746 228 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 B3GALT5-AS1P59052 145 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 KCNJ10P78508 379 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 CBX1P83916 185 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 MXRA7P84157 204 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 LIPEQ05469 1076 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 BNIP1Q12981 228 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 GANABQ14697 944 aaKnown RBP6.9□□□□□ -1.3
ABCD4-220ENST00000553998 LARS2Q15031 903 aaKnown RBP6.9□□□□□ -1.3
ABCD4-220ENST00000553998 CD226Q15762 336 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 SAMD4BQ5PRF9 694 aaKnown RBP6.9□□□□□ -1.3
ABCD4-220ENST00000553998 PDZK1Q5T2W1 519 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 RNF220Q5VTB9 566 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 DHRS4L2Q6PKH6 230 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 C6orf89Q6UWU4 347 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 CCDC80Q76M96 950 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.9□□□□□ -1.3
ABCD4-220ENST00000553998 IFNEQ86WN2 208 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 ZNF614Q8N883 585 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 ZNF610Q8N9Z0 462 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 RBM15BQ8NDT2 890 aaKnown RBP6.9□□□□□ -1.3
ABCD4-220ENST00000553998 BHLHE22Q8NFJ8 381 aaPredicted RBP6.9□□□□□ -1.3
ABCD4-220ENST00000553998 OR4K17Q8NGC6 315 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 OR52P1PQ8NH57 321 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 OR14L1PQ8NHC6 308 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 PHOSPHO1Q8TCT1 267 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 DUSP19Q8WTR2 217 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 WDR60Q8WVS4 1066 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 ZG16BQ96DA0 208 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 TRMT61AQ96FX7 289 aaKnown RBP6.9□□□□□ -1.3
ABCD4-220ENST00000553998 RTN4RQ9BZR6 473 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 LAT2Q9GZY6 243 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 OR10A4Q9H209 315 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 ALG2Q9H553 416 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 EVA1AQ9H8M9 152 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 RNF122Q9H9V4 155 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 EXOSC3Q9NQT5 275 aaKnown RBP6.9□□□□□ -1.3
ABCD4-220ENST00000553998 YAE1D1Q9NRH1 226 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 PLSCR4Q9NRQ2 329 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 TAS2R10Q9NYW0 307 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 CDC42EP3Q9UKI2 254 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 ZNF232Q9UNY5 417 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 ZNF175Q9Y473 711 aa6.9□□□□□ -1.3
ABCD4-220ENST00000553998 GPC6Q9Y625 555 aaPredicted RBP6.9□□□□□ -1.3
ABCD4-220ENST00000553998 A0A087WZY1 265 aa6.89□□□□□ -1.31
ABCD4-220ENST00000553998 A0A096LNT2 108 aa6.89□□□□□ -1.31
ABCD4-220ENST00000553998 CENPVL1A0A0U1RR11 272 aa6.89□□□□□ -1.31
ABCD4-220ENST00000553998 SLC22A20A6NK97 555 aa6.89□□□□□ -1.31
ABCD4-220ENST00000553998 NME4O00746 187 aa6.89□□□□□ -1.31
ABCD4-220ENST00000553998 ZNF264O43296 627 aa6.89□□□□□ -1.31
ABCD4-220ENST00000553998 WIPF1O43516 503 aa6.89□□□□□ -1.31
ABCD4-220ENST00000553998 MFN2O95140 757 aa6.89□□□□□ -1.31
ABCD4-220ENST00000553998 PLAUP00749 431 aa6.89□□□□□ -1.31
ABCD4-220ENST00000553998 PABPC4LP0CB38 370 aaKnown RBP6.89□□□□□ -1.31
ABCD4-220ENST00000553998 PEPDP12955 493 aa6.89□□□□□ -1.31
ABCD4-220ENST00000553998 HSD17B1P14061 328 aa6.89□□□□□ -1.31
ABCD4-220ENST00000553998 PGM1P36871 562 aa6.89□□□□□ -1.31
ABCD4-220ENST00000553998 SLC6A8P48029 635 aa6.89□□□□□ -1.31
ABCD4-220ENST00000553998 GSK3BP49841 420 aa6.89□□□□□ -1.31
ABCD4-220ENST00000553998 RASSF2P50749 326 aa6.89□□□□□ -1.31
ABCD4-220ENST00000553998 P2RX1P51575 399 aa6.89□□□□□ -1.31
ABCD4-220ENST00000553998 DSCR4P56555 118 aaPredicted RBP6.89□□□□□ -1.31
ABCD4-220ENST00000553998 RPS4XP62701 263 aaKnown RBP6.89□□□□□ -1.31
ABCD4-220ENST00000553998 SLC25A3Q00325 362 aa6.89□□□□□ -1.31
ABCD4-220ENST00000553998 MAPK14Q16539 360 aa6.89□□□□□ -1.31
ABCD4-220ENST00000553998 FXNQ16595 210 aa6.89□□□□□ -1.31
ABCD4-220ENST00000553998 GLYR1Q49A26 553 aaPredicted RBP6.89□□□□□ -1.31
ABCD4-220ENST00000553998 DNAL1Q4LDG9 190 aa6.89□□□□□ -1.31
ABCD4-220ENST00000553998 ZNF311Q5JNZ3 666 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms