RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 NAGAP17050 411 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 ITGA2P17301 1181 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 DRD5P21918 477 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 CHMP24386 653 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 GSTM2P28161 218 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 AGTR1P30556 359 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 RBMXP38159 391 aaKnown RBP2.75□□□□□ -1.97
SLIRP-202ENST00000553981 MAP3K8P41279 467 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 PPICP45877 212 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 PTDSS1P48651 473 aaKnown RBP2.75□□□□□ -1.97
SLIRP-202ENST00000553981 CDH13P55290 713 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 RPS4XP62701 263 aaKnown RBP2.75□□□□□ -1.97
SLIRP-202ENST00000553981 SKP1P63208 163 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 VLDLRP98155 873 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 BSPH1Q075Z2 132 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 LOXL1Q08397 574 aaPredicted RBP2.75□□□□□ -1.97
SLIRP-202ENST00000553981 PLCXD2Q0VAA5 305 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 PDIA2Q13087 525 aaKnown RBP2.75□□□□□ -1.97
SLIRP-202ENST00000553981 STX5Q13190 355 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 SNTA1Q13424 505 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 GAB1Q13480 694 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 RCAN2Q14206 197 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 FRG1Q14331 258 aaKnown RBP2.75□□□□□ -1.97
SLIRP-202ENST00000553981 GANABQ14697 944 aaKnown RBP2.75□□□□□ -1.97
SLIRP-202ENST00000553981 TOMM34Q15785 309 aaPredicted RBP2.75□□□□□ -1.97
SLIRP-202ENST00000553981 BCL2A1Q16548 175 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 KBTBD12Q3ZCT8 623 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 CHRFAM7AQ494W8 412 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 ZNF672Q499Z4 452 aaPredicted RBP2.75□□□□□ -1.97
SLIRP-202ENST00000553981 TMEM35AQ53FP2 167 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 BEX5Q5H9J7 111 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 TECRLQ5HYJ1 363 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 SCIMPQ6UWF3 145 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 TFAP2EQ6VUC0 442 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 OLIG3Q7RTU3 272 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 LRRC70Q7Z2Q7 622 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 ADAMTSL2Q86TH1 951 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 EXOC3L1Q86VI1 746 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 TUSC5Q8IXB3 177 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 TAGAPQ8N103 731 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 SLC35F6Q8N357 371 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 METTL4Q8N3J2 472 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 TBC1D19Q8N5T2 526 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 C11orf44Q8N8P7 122 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 C17orf47Q8NEP4 570 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 OR4K14Q8NGD5 310 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 OR9A2Q8NGT5 310 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 OR10D3Q8NH80 312 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 PPP1R35Q8TAP8 253 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 C10orf105Q8TEF2 133 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 DUSP19Q8WTR2 217 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 ABHD3Q8WU67 409 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 SMAP2Q8WU79 429 aaPredicted RBP2.75□□□□□ -1.97
SLIRP-202ENST00000553981 MSI2Q96DH6 328 aaKnown RBP2.75□□□□□ -1.97
SLIRP-202ENST00000553981 CMTM7Q96FZ5 175 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 APIPQ96GX9 242 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 ZFP3Q96NJ6 502 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 BTBD9Q96Q07 612 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 ZNF300Q96RE9 604 aaPredicted RBP2.75□□□□□ -1.97
SLIRP-202ENST00000553981 TNFRSF13CQ96RJ3 184 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 KRT12Q99456 494 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 RBBP8Q99708 897 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 EFCAB11Q9BUY7 163 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 NTMT1Q9BV86 223 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 TMEM185BQ9H7F4 350 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 METTL7AQ9H8H3 244 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 COQ10BQ9H8M1 238 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 ANKZF1Q9H8Y5 726 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 ACTR8Q9H981 624 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 SAYSD1Q9NPB0 183 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 PPANQ9NQ55 473 aaKnown RBP2.75□□□□□ -1.97
SLIRP-202ENST00000553981 ARL8BQ9NVJ2 186 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 GRHL1Q9NZI5 618 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 KLRF1Q9NZS2 232 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 BCAP29Q9UHQ4 241 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 CORO1CQ9ULV4 474 aaPredicted RBP2.75□□□□□ -1.97
SLIRP-202ENST00000553981 ICAM5Q9UMF0 924 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 VDAC3Q9Y277 283 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 SNX24Q9Y343 169 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 MRPS18CQ9Y3D5 142 aaKnown RBP2.75□□□□□ -1.97
SLIRP-202ENST00000553981 RYR3Q15413 4870 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 NIPBLQ6KC79 2804 aaeCLIP2.75□□□□□ -1.97
SLIRP-202ENST00000553981 ZANQ9Y493 2812 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 NOTCH3Q9UM47 2321 aa2.75□□□□□ -1.97
SLIRP-202ENST00000553981 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 IGLV3-32A0A0A0MS00 114 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 GOLGA8QA0A0J9YX86 632 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 TCRBV9S1A1TA0A576 114 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 SLC22A23A1A5C7 686 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 LRP5LA4QPB2 252 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 GOLGA8OA6NCC3 632 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 IFITM10A6NMD0 228 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 SUPT3HB4E1H0 165 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 GOLGA8NF8WBI6 632 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 GOLGA8RI6L899 631 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 UPK1AO00322 258 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 FOXE1O00358 373 aaPredicted RBP2.74□□□□□ -1.97
SLIRP-202ENST00000553981 WNT9BO14905 357 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 CLOCKO15516 846 aa2.74□□□□□ -1.97
SLIRP-202ENST00000553981 LMX1BO60663 402 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms