RNA–Protein interactions for RNA: ENST00000553947.1

AL049839.2-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AL049839.2, Length 3,067 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049839.2-201ENST00000553947 CLDND1Q9NY35 253 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 TRIOO75962 3097 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 A0A1B0GW55 424 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 A0A1W2PRQ8 180 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 GSAPA4D1B5 854 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 WRBO00258 174 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 EMC8O43402 210 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 HOXC4P09017 264 aaPredicted RBP8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 DUX4L2P0CJ85 424 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 DUX4L3P0CJ86 424 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 DUX4L4P0CJ87 422 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 DUX4L5P0CJ88 424 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 DUX4L6P0CJ89 424 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 DUX4L7P0CJ90 424 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 SPP1P10451 314 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 MPIP34949 423 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 SOX18P35713 384 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 CCR6P51684 374 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 PGDP52209 483 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 SIM1P81133 766 aaPredicted RBP8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 RUNX2Q13950 521 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 ALG11Q2TAA5 492 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 DEFB134Q4QY38 66 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 C3orf38Q5JPI3 329 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 FAM74A1Q5RGS3 127 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 IDNKQ5T6J7 187 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 FCRL6Q6DN72 434 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 TMEM91Q6ZNR0 172 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 IQCHQ86VS3 1027 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 TCEANCQ8N8B7 351 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 PROKR2Q8NFJ6 384 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 OR7G2Q8NG99 324 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 OR56A1Q8NGH5 318 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 RPLP0P6Q8NHW5 317 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 SCARB1Q8WTV0 552 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 ADAMTS14Q8WXS8 1223 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 COL26A1Q96A83 441 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 MRPS24Q96EL2 167 aaKnown RBP8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 PTDSS2Q9BVG9 487 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 TCEAL2Q9H3H9 227 aaPredicted RBP8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 PRDM9Q9NQV7 894 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 DUX4Q9UBX2 424 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 NTNG1Q9Y2I2 539 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 MRPS2Q9Y399 296 aaKnown RBP8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 NUBP2Q9Y5Y2 271 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 SCN2AQ99250 2005 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 ZNF860A6NHJ4 632 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 MPTX1A8MV57 137 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 ARPC5O15511 151 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 NR2F6P10588 404 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 PVRP15151 417 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 UGT2B7P16662 529 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 HNRNPA2B1P22626 353 aaKnown RBP8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 NFYAP23511 347 aaPredicted RBP8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 RORAP35398 523 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 LSSP48449 732 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 PDX1P52945 283 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 SNRPEP62304 92 aaKnown RBP8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 GPR18Q14330 331 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 ACSM5Q6NUN0 579 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 LYPD4Q6UWN0 246 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 LRRN1Q6UXK5 716 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 CASP12Q6UXS9 341 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 RBMS3Q6XE24 437 aaKnown RBP8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 MTSS1LQ765P7 747 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 SHFQ7M4L6 423 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 TOMM5Q8N4H5 51 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 ZNF565Q8N9K5 539 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 SLC16A11Q8NCK7 471 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 GATAD2BQ8WXI9 593 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 GAL3ST3Q96A11 431 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 TM4SF19Q96DZ7 209 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 SLC35A4Q96G79 324 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 WDR77Q9BQA1 342 aaPredicted RBP8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 PAPOLGQ9BWT3 736 aaKnown RBP8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 TVP23BQ9NYZ1 205 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 NLGN3Q9NZ94 848 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 NDOR1Q9UHB4 597 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 MKL2Q9ULH7 1088 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 CLEC4AQ9UMR7 237 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 ZNF780BQ9Y6R6 833 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 ARHGEF17Q96PE2 2063 aaPredicted RBP8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 FANCMQ8IYD8 2048 aa8.35□□□□□ -1.07
AL049839.2-201ENST00000553947 FAM170BA6NMN3 283 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 CASC3O15234 703 aaKnown RBP8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 PRKYO43930 277 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 CELA2BP08218 269 aaPredicted RBP8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 TRHRP34981 398 aaPredicted RBP8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 TSFMP43897 325 aaKnown RBP8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 ARFIP1P53367 373 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 RPS15AP62244 130 aaKnown RBP8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 SNRPGP62308 76 aaKnown RBP8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 PRR5P85299 388 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 ID2Q02363 134 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 RBMS2Q15434 407 aaKnown RBP8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 CCDC157Q569K6 752 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 ZNF542PQ5EBM4 170 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 ZNF311Q5JNZ3 666 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 PRSS41Q7RTY9 318 aa8.34□□□□□ -1.07
AL049839.2-201ENST00000553947 CBLN2Q8IUK8 224 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms