RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 OR2T12Q8NG77 320 aa21.07■□□□□ 0.96
TDP1-205ENST00000553527 ZNF583Q96ND8 569 aa21.07■□□□□ 0.96
TDP1-205ENST00000553527 KLHL4Q9C0H6 718 aa21.07■□□□□ 0.96
TDP1-205ENST00000553527 GLRX2Q9NS18 164 aa21.07■□□□□ 0.96
TDP1-205ENST00000553527 NDRG3Q9UGV2 375 aa21.07■□□□□ 0.96
TDP1-205ENST00000553527 ZNF232Q9UNY5 417 aa21.07■□□□□ 0.96
TDP1-205ENST00000553527 SH3D21A4FU49 640 aa21.06■□□□□ 0.96
TDP1-205ENST00000553527 GKN3PP0CG01 181 aa21.06■□□□□ 0.96
TDP1-205ENST00000553527 AQP1P29972 269 aa21.06■□□□□ 0.96
TDP1-205ENST00000553527 ZNF836Q6ZNA1 936 aa21.06■□□□□ 0.96
TDP1-205ENST00000553527 GRINAQ7Z429 371 aa21.06■□□□□ 0.96
TDP1-205ENST00000553527 CDH24Q86UP0 819 aa21.06■□□□□ 0.96
TDP1-205ENST00000553527 KRT73Q86Y46 540 aa21.06■□□□□ 0.96
TDP1-205ENST00000553527 DEFB107AQ8IZN7 70 aa21.06■□□□□ 0.96
TDP1-205ENST00000553527 RBM15BQ8NDT2 890 aaKnown RBP21.06■□□□□ 0.96
TDP1-205ENST00000553527 OR6K3Q8NGY3 331 aa21.06■□□□□ 0.96
TDP1-205ENST00000553527 CLEC4MQ9H2X3 399 aaPredicted RBP21.06■□□□□ 0.96
TDP1-205ENST00000553527 ALG2Q9H553 416 aa21.06■□□□□ 0.96
TDP1-205ENST00000553527 PLSCR4Q9NRQ2 329 aa21.06■□□□□ 0.96
TDP1-205ENST00000553527 RASSF1Q9NS23 344 aa21.06■□□□□ 0.96
TDP1-205ENST00000553527 TMEM181Q9P2C4 612 aa21.06■□□□□ 0.96
TDP1-205ENST00000553527 USP22Q9UPT9 525 aa21.06■□□□□ 0.96
TDP1-205ENST00000553527 FREM1Q5H8C1 2179 aa21.06■□□□□ 0.96
TDP1-205ENST00000553527 ANKRD17O75179 2603 aaKnown RBP21.05■□□□□ 0.96
TDP1-205ENST00000553527 CFAP73A6NFT4 308 aa21.05■□□□□ 0.96
TDP1-205ENST00000553527 SULT2B1O00204 365 aa21.05■□□□□ 0.96
TDP1-205ENST00000553527 CASKO14936 926 aa21.05■□□□□ 0.96
TDP1-205ENST00000553527 PRKD3O94806 890 aa21.05■□□□□ 0.96
TDP1-205ENST00000553527 RAC3P60763 192 aa21.05■□□□□ 0.96
TDP1-205ENST00000553527 POU4F3Q15319 338 aa21.05■□□□□ 0.96
TDP1-205ENST00000553527 LIN52Q52LA3 116 aa21.05■□□□□ 0.96
TDP1-205ENST00000553527 SYT14P1Q58G82 188 aa21.05■□□□□ 0.96
TDP1-205ENST00000553527 TMEM201Q5SNT2 666 aa21.05■□□□□ 0.96
TDP1-205ENST00000553527 INTS11Q5TA45 600 aaKnown RBP21.05■□□□□ 0.96
TDP1-205ENST00000553527 ANKRD34AQ69YU3 496 aa21.05■□□□□ 0.96
TDP1-205ENST00000553527 RINLQ6ZS11 566 aa21.05■□□□□ 0.96
TDP1-205ENST00000553527 ADGRG3Q86Y34 549 aa21.05■□□□□ 0.96
TDP1-205ENST00000553527 TUSC5Q8IXB3 177 aa21.05■□□□□ 0.96
TDP1-205ENST00000553527 RNF128Q8TEB7 428 aa21.05■□□□□ 0.96
TDP1-205ENST00000553527 ZNF607Q96SK3 696 aa21.05■□□□□ 0.96
TDP1-205ENST00000553527 KLHL28Q9NXS3 571 aa21.05■□□□□ 0.96
TDP1-205ENST00000553527 ELOVL5Q9NYP7 299 aa21.05■□□□□ 0.96
TDP1-205ENST00000553527 CHRNA9Q9UGM1 479 aa21.05■□□□□ 0.96
TDP1-205ENST00000553527 ZNF443Q9Y2A4 671 aaPredicted RBP21.05■□□□□ 0.96
TDP1-205ENST00000553527 ELOVL7A1L3X0 281 aa21.04■□□□□ 0.96
TDP1-205ENST00000553527 CDHR4A6H8M9 788 aa21.04■□□□□ 0.96
TDP1-205ENST00000553527 ENO4A6NNW6 628 aa21.04■□□□□ 0.96
TDP1-205ENST00000553527 ETS2P15036 469 aa21.04■□□□□ 0.96
TDP1-205ENST00000553527 KLK2P20151 261 aa21.04■□□□□ 0.96
TDP1-205ENST00000553527 AGTR1P30556 359 aa21.04■□□□□ 0.96
TDP1-205ENST00000553527 GSK3BP49841 420 aa21.04■□□□□ 0.96
TDP1-205ENST00000553527 DIO1P49895 249 aa21.04■□□□□ 0.96
TDP1-205ENST00000553527 LARS2Q15031 903 aaKnown RBP21.04■□□□□ 0.96
TDP1-205ENST00000553527 DAZAP2Q15038 168 aaPredicted RBP21.04■□□□□ 0.96
TDP1-205ENST00000553527 RNPS1Q15287 305 aaKnown RBP21.04■□□□□ 0.96
TDP1-205ENST00000553527 ZNF550Q7Z398 422 aa21.04■□□□□ 0.96
TDP1-205ENST00000553527 MICU2Q8IYU8 434 aa21.04■□□□□ 0.96
TDP1-205ENST00000553527 CLIP4Q8N3C7 705 aa21.04■□□□□ 0.96
TDP1-205ENST00000553527 ZNF775Q96BV0 537 aaPredicted RBP21.04■□□□□ 0.96
TDP1-205ENST00000553527 DACH2Q96NX9 599 aa21.04■□□□□ 0.96
TDP1-205ENST00000553527 WFIKKN1Q96NZ8 548 aa21.04■□□□□ 0.96
TDP1-205ENST00000553527 KCTD14Q9BQ13 255 aaPredicted RBP21.04■□□□□ 0.96
TDP1-205ENST00000553527 SPATA5L1Q9BVQ7 753 aa21.04■□□□□ 0.96
TDP1-205ENST00000553527 OR11A1Q9GZK7 315 aa21.04■□□□□ 0.96
TDP1-205ENST00000553527 SPIN1Q9Y657 262 aaPredicted RBP21.04■□□□□ 0.96
TDP1-205ENST00000553527 SPG11Q96JI7 2443 aa21.03■□□□□ 0.96
TDP1-205ENST00000553527 AKAP6Q13023 2319 aa21.03■□□□□ 0.96
TDP1-205ENST00000553527 TMED7-TICAM2A0A0A6YYA0 188 aa21.03■□□□□ 0.96
TDP1-205ENST00000553527 C16orf97H3BN30 126 aa21.03■□□□□ 0.96
TDP1-205ENST00000553527 THBS1P07996 1170 aa21.03■□□□□ 0.96
TDP1-205ENST00000553527 UQCRBP14927 111 aa21.03■□□□□ 0.96
TDP1-205ENST00000553527 TACR3P29371 465 aa21.03■□□□□ 0.96
TDP1-205ENST00000553527 UGT2B10P36537 528 aa21.03■□□□□ 0.96
TDP1-205ENST00000553527 PCBP3P57721 371 aaKnown RBP21.03■□□□□ 0.96
TDP1-205ENST00000553527 EPS8Q12929 822 aa21.03■□□□□ 0.96
TDP1-205ENST00000553527 ZNF311Q5JNZ3 666 aa21.03■□□□□ 0.96
TDP1-205ENST00000553527 SAMD4BQ5PRF9 694 aaKnown RBP21.03■□□□□ 0.96
TDP1-205ENST00000553527 C6orf89Q6UWU4 347 aa21.03■□□□□ 0.96
TDP1-205ENST00000553527 TMPPEQ6ZT21 453 aa21.03■□□□□ 0.96
TDP1-205ENST00000553527 NUFIP2Q7Z417 695 aaKnown RBP21.03■□□□□ 0.96
TDP1-205ENST00000553527 LURAP1LQ8IV03 231 aa21.03■□□□□ 0.96
TDP1-205ENST00000553527 CADM2Q8N3J6 435 aa21.03■□□□□ 0.96
TDP1-205ENST00000553527 SLC25A43Q8WUT9 341 aaPredicted RBP21.03■□□□□ 0.96
TDP1-205ENST00000553527 ZC3HAV1LQ96H79 300 aaKnown RBP21.03■□□□□ 0.96
TDP1-205ENST00000553527 ARL5BQ96KC2 179 aa21.03■□□□□ 0.96
TDP1-205ENST00000553527 GMPR2Q9P2T1 348 aaKnown RBP21.03■□□□□ 0.96
TDP1-205ENST00000553527 IFT52Q9Y366 437 aa21.03■□□□□ 0.96
TDP1-205ENST00000553527 TMED7Q9Y3B3 224 aa21.03■□□□□ 0.96
TDP1-205ENST00000553527 POLR2HP52434 150 aaKnown RBP21.02■□□□□ 0.96
TDP1-205ENST00000553527 RASGEF1BQ0VAM2 473 aa21.02■□□□□ 0.96
TDP1-205ENST00000553527 VEZF1Q14119 521 aa21.02■□□□□ 0.96
TDP1-205ENST00000553527 PATL1Q86TB9 770 aaKnown RBP21.02■□□□□ 0.96
TDP1-205ENST00000553527 STK32CQ86UX6 486 aa21.02■□□□□ 0.96
TDP1-205ENST00000553527 CDC20BQ86Y33 519 aa21.02■□□□□ 0.96
TDP1-205ENST00000553527 ZNF440Q8IYI8 595 aa21.02■□□□□ 0.96
TDP1-205ENST00000553527 SLC43A2Q8N370 569 aa21.02■□□□□ 0.96
TDP1-205ENST00000553527 CDRT15Q96T59 188 aa21.02■□□□□ 0.96
TDP1-205ENST00000553527 MED18Q9BUE0 208 aa21.02■□□□□ 0.96
TDP1-205ENST00000553527 C1orf21Q9H246 121 aa21.02■□□□□ 0.96
TDP1-205ENST00000553527 LIME1Q9H400 295 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms