RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 TMCO6Q96DC7 493 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 CLIP3Q96DZ5 547 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 MRPL48Q96GC5 212 aaKnown RBP6.69□□□□□ -1.34
ATXN3-221ENST00000553498 SAMD8Q96LT4 415 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 GPX7Q96SL4 187 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-221ENST00000553498 LPAR4Q99677 370 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 NUDT9Q9BW91 350 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 DPH1Q9BZG8 443 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 NXF5Q9H1B4 397 aaKnown RBP6.69□□□□□ -1.34
ATXN3-221ENST00000553498 DSN1Q9H410 356 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 MEPEQ9NQ76 525 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-221ENST00000553498 FBXO8Q9NRD0 319 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 NDUFB11Q9NX14 153 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 OSGIN1Q9UJX0 560 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 NTNG1Q9Y2I2 539 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 ZNF337Q9Y3M9 751 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 PCDHGB7Q9Y5F8 929 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 PCDHGA3Q9Y5H0 932 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 CACNA1IQ9P0X4 2223 aa6.69□□□□□ -1.34
ATXN3-221ENST00000553498 IDSB3KWA1 339 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 B4E171 279 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 CLDN25C9JDP6 229 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 PRR23D1E9PI22 279 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-221ENST00000553498 M0R129 80 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 FLRT2O43155 660 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 AKAP8O43823 692 aaKnown RBP6.68□□□□□ -1.34
ATXN3-221ENST00000553498 PIP5K1CO60331 668 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 REM1O75628 298 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 OR7A10O76100 309 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 MT-ATP6P00846 226 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 IGHEP01854 428 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 KLK3P07288 261 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-221ENST00000553498 INHBBP09529 407 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 PRR23D2P0DMB1 279 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-221ENST00000553498 CPEP16870 476 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 ATP6V1E1P36543 226 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 TSPAN7P41732 249 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 EMP2P54851 167 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 DLX5P56178 289 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 TAS2R43P59537 309 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 RPS4XP62701 263 aaKnown RBP6.68□□□□□ -1.34
ATXN3-221ENST00000553498 MC2RQ01718 297 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 ZFP36L1Q07352 338 aaKnown RBP6.68□□□□□ -1.34
ATXN3-221ENST00000553498 CRYZQ08257 329 aaKnown RBP6.68□□□□□ -1.34
ATXN3-221ENST00000553498 SRSF5Q13243 272 aaKnown RBP6.68□□□□□ -1.34
ATXN3-221ENST00000553498 AQP6Q13520 282 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 IL10RAQ13651 578 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 CBFBQ13951 182 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 ZNF846Q147U1 533 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 EMC4Q5J8M3 183 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 SLC35D3Q5M8T2 416 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 CLEC12AQ5QGZ9 265 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 LCN1P1Q5VSP4 162 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 C1orf189Q5VU69 101 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 ZC3H14Q6PJT7 736 aaKnown RBP6.68□□□□□ -1.34
ATXN3-221ENST00000553498 TMEM205Q6UW68 189 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 TMPRSS11AQ6ZMR5 421 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 ANKRD37Q7Z713 158 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 ATG4DQ86TL0 474 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-221ENST00000553498 ADCK1Q86TW2 530 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 SLCO6A1Q86UG4 719 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 C9orf40Q8IXQ3 194 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 GPALPP1Q8IXQ4 340 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 DND1Q8IYX4 353 aaKnown RBP6.68□□□□□ -1.34
ATXN3-221ENST00000553498 SHISA5Q8N114 240 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 CADM2Q8N3J6 435 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 Q8N3U1 123 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 KLHL36Q8N4N3 616 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 OR5W2Q8NH69 310 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 PFN4Q8NHR9 129 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 PHOSPHO1Q8TCT1 267 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 HAVCR2Q8TDQ0 301 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 DOK4Q8TEW6 326 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-221ENST00000553498 C3orf49Q96BT1 292 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 EFHD2Q96C19 240 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-221ENST00000553498 ARSGQ96EG1 525 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 OPALINQ96PE5 141 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 CTRCQ99895 268 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 ZPBPQ9BS86 351 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 IFT27Q9BW83 186 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 TBL1XR1Q9BZK7 514 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 NXF2Q9GZY0 626 aaKnown RBP6.68□□□□□ -1.34
ATXN3-221ENST00000553498 DCSTAMPQ9H295 470 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 SYNDIG1Q9H7V2 258 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 SLC22A11Q9NSA0 550 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 C20orf141Q9NUB4 165 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 CTSFQ9UBX1 484 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 STUB1Q9UNE7 303 aa6.68□□□□□ -1.34
ATXN3-221ENST00000553498 CAB39Q9Y376 341 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-221ENST00000553498 ANKRD12Q6UB98 2062 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 NUMA1Q14980 2115 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 LOC102723996A0A087X1L8 192 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 PNMA8CA0A1B0GUJ8 204 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 TMEM238LA0A1B0GVL6 79 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 C9J4A7 227 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 J3QRE1 110 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 TAF4O00268 1085 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 FADS1O60427 444 aa6.67□□□□□ -1.34
ATXN3-221ENST00000553498 CSO75390 466 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms