RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 SLC16A1P53985 500 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 OR2B6P58173 313 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 COPZ1P61923 177 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 SLC35A1P78382 337 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 NKX6-1P78426 367 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-207ENST00000553290 H3F3AP84243 136 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 FOXD4Q12950 439 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-207ENST00000553290 LRIF1Q5T3J3 769 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 RNF220Q5VTB9 566 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 PRAMEF8Q5VWM4 474 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 PRAMEF7Q5VXH5 474 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 SHEQ5VZ18 495 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 ZNF836Q6ZNA1 936 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 ZNF704Q6ZNC4 412 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-207ENST00000553290 FUNDC1Q8IVP5 155 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 SPDL1Q96EA4 605 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 TMEM19Q96HH6 336 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 CCL19Q99731 98 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 SPATA9Q9BWV2 254 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 ADAM19Q9H013 955 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 BCL2L10Q9HD36 194 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 A4GALTQ9NPC4 353 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 RLIMQ9NVW2 624 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 CCDC167Q9P0B6 97 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 PRSS50Q9UI38 385 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 NOSIPQ9Y314 301 aaKnown RBP11.48□□□□□ -0.57
ACTN1-207ENST00000553290 RAI1Q7Z5J4 1906 aaPredicted RBP11.48□□□□□ -0.57
ACTN1-207ENST00000553290 DSCAMO60469 2012 aa11.48□□□□□ -0.57
ACTN1-207ENST00000553290 GKN3PP0CG01 181 aa11.47□□□□□ -0.57
ACTN1-207ENST00000553290 HOXB9P17482 250 aaPredicted RBP11.47□□□□□ -0.57
ACTN1-207ENST00000553290 PPIBP23284 216 aaKnown RBP11.47□□□□□ -0.57
ACTN1-207ENST00000553290 ACAA2P42765 397 aaKnown RBP11.47□□□□□ -0.57
ACTN1-207ENST00000553290 TSC22D1Q15714 1073 aa11.47□□□□□ -0.57
ACTN1-207ENST00000553290 TAB1Q15750 504 aa11.47□□□□□ -0.57
ACTN1-207ENST00000553290 RPS26P11Q5JNZ5 115 aaPredicted RBP11.47□□□□□ -0.57
ACTN1-207ENST00000553290 WBP2NLQ6ICG8 309 aa11.47□□□□□ -0.57
ACTN1-207ENST00000553290 BHLHA15Q7RTS1 189 aaPredicted RBP11.47□□□□□ -0.57
ACTN1-207ENST00000553290 SSX8Q7RTT4 187 aa11.47□□□□□ -0.57
ACTN1-207ENST00000553290 BBS10Q8TAM1 723 aa11.47□□□□□ -0.57
ACTN1-207ENST00000553290 CKAP2Q8WWK9 683 aa11.47□□□□□ -0.57
ACTN1-207ENST00000553290 STON2Q8WXE9 905 aa11.47□□□□□ -0.57
ACTN1-207ENST00000553290 APH1AQ96BI3 265 aa11.47□□□□□ -0.57
ACTN1-207ENST00000553290 MAGEB18Q96M61 343 aa11.47□□□□□ -0.57
ACTN1-207ENST00000553290 TMEM204Q9BSN7 226 aa11.47□□□□□ -0.57
ACTN1-207ENST00000553290 NAA11Q9BSU3 229 aaPredicted RBP11.47□□□□□ -0.57
ACTN1-207ENST00000553290 POTEKPQ9BYX7 375 aa11.47□□□□□ -0.57
ACTN1-207ENST00000553290 RABEP2Q9H5N1 569 aa11.47□□□□□ -0.57
ACTN1-207ENST00000553290 ESRP2Q9H6T0 727 aaKnown RBP11.47□□□□□ -0.57
ACTN1-207ENST00000553290 MTORP42345 2549 aa11.47□□□□□ -0.57
ACTN1-207ENST00000553290 PRR14LQ5THK1 2151 aa11.47□□□□□ -0.57
ACTN1-207ENST00000553290 ROS1P08922 2347 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 C5orf58C9J3I9 102 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 NR5A2O00482 541 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 TMCC2O75069 709 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 MRPL33O75394 65 aaKnown RBP11.46□□□□□ -0.57
ACTN1-207ENST00000553290 LYZL6O75951 148 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 GPIP06744 558 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 IMPDH2P12268 514 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 ETS2P15036 469 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 H2AFXP16104 143 aaPredicted RBP11.46□□□□□ -0.57
ACTN1-207ENST00000553290 NCF2P19878 526 aaPredicted RBP11.46□□□□□ -0.57
ACTN1-207ENST00000553290 IGHV1-2P23083 117 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 CAPRIN1Q14444 709 aaKnown RBP11.46□□□□□ -0.57
ACTN1-207ENST00000553290 SQLEQ14534 574 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 AGKQ53H12 422 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 ZNF311Q5JNZ3 666 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 NCMAPQ5T1S8 102 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 FBXW9Q5XUX1 488 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 ALKBH2Q6NS38 261 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 PAQR6Q6TCH4 344 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 P2RY8Q86VZ1 359 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 P3H2Q8IVL5 708 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 CCDC103Q8IW40 242 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 UBE2J2Q8N2K1 259 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 CLIP4Q8N3C7 705 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 CADM2Q8N3J6 435 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 WFDC11Q8NEX6 87 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 SLC35B4Q969S0 331 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 MUCL1Q96DR8 90 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 DNAJA3Q96EY1 480 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 SLC52A3Q9NQ40 469 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 DLL4Q9NR61 685 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 PARPBPQ9NWS1 579 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 SLC25A37Q9NYZ2 338 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 CORO2BQ9UQ03 480 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 GMEB1Q9Y692 573 aa11.46□□□□□ -0.57
ACTN1-207ENST00000553290 C2CD3Q4AC94 2353 aa11.46□□□□□ -0.58
ACTN1-207ENST00000553290 ARID1AO14497 2285 aa11.46□□□□□ -0.58
ACTN1-207ENST00000553290 ZNF469Q96JG9 3925 aaPredicted RBP11.45□□□□□ -0.58
ACTN1-207ENST00000553290 FLNAP21333 2647 aaKnown RBP11.45□□□□□ -0.58
ACTN1-207ENST00000553290 VPS13CQ709C8 3753 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 SETD2Q9BYW2 2564 aaPredicted RBP11.45□□□□□ -0.58
ACTN1-207ENST00000553290 ZC3H12DA2A288 527 aaKnown RBP11.45□□□□□ -0.58
ACTN1-207ENST00000553290 HS3ST1O14792 307 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 PGM3O95394 542 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 PLAUP00749 431 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 CD3EP07766 207 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 NUDT7P0C024 238 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 ARAFP10398 606 aa11.45□□□□□ -0.58
ACTN1-207ENST00000553290 GGT1P19440 569 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms