RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 SPRP35270 261 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-217ENST00000553287 KIAA1024LP59773 190 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 RHOAP61586 193 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 RPS27AP62979 156 aaKnown RBP3.48□□□□□ -1.85
ATXN3-217ENST00000553287 TRA2BP62995 288 aaKnown RBP3.48□□□□□ -1.85
ATXN3-217ENST00000553287 RPP38P78345 283 aaKnown RBP3.48□□□□□ -1.85
ATXN3-217ENST00000553287 CYTH1Q15438 398 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 CDO1Q16878 200 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 ZNF770Q6IQ21 691 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-217ENST00000553287 RWDD4Q6NW29 188 aaKnown RBP3.48□□□□□ -1.85
ATXN3-217ENST00000553287 PNCKQ6P2M8 343 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 ANKRD46Q86W74 232 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 IQCKQ8N0W5 287 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 LINC00301Q8NCQ3 95 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 GOLGA5Q8TBA6 731 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 UBE2Q2Q8WVN8 375 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 ITLN2Q8WWU7 325 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-217ENST00000553287 LIPHQ8WWY8 451 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 PNPLA2Q96AD5 504 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 RAB7BQ96AH8 199 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 BPIFA2Q96DR5 249 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 RADILQ96JH8 1075 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 HSFY1Q96LI6 401 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 RUNDC3BQ96NL0 473 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 MLPHQ9BV36 600 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-217ENST00000553287 TRIM7Q9C029 511 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 ILKAPQ9H0C8 392 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-217ENST00000553287 THAP9Q9H5L6 903 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 UBE2TQ9NPD8 197 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-217ENST00000553287 LHX9Q9NQ69 397 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 ABCB10Q9NRK6 738 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 SAMSN1Q9NSI8 373 aaKnown RBP3.48□□□□□ -1.85
ATXN3-217ENST00000553287 NFKBIL1Q9UBC1 381 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-217ENST00000553287 ABCD2Q9UBJ2 740 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 LHX3Q9UBR4 397 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 KCNK6Q9Y257 313 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 NBEAL1Q6ZS30 2694 aa3.48□□□□□ -1.85
ATXN3-217ENST00000553287 TEX48A0A1B0GUV7 120 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 A0A1B0GVL5 298 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 PVALEFA0A1B0GWK0 134 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 A0A1W2PQ72 361 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 HTR3EA5X5Y0 456 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 GOLGA8SH3BPF8 625 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 MAPK13O15264 365 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 PAEPP09466 180 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 CD99P14209 185 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 KRTAP5-9P26371 169 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 PTPN4P29074 926 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 SRD5A2P31213 254 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 TIA1P31483 386 aaKnown RBP eCLIP3.47□□□□□ -1.85
ATXN3-217ENST00000553287 OTX2P32243 289 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 OR3A1P47881 315 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 ZCWPW2Q504Y3 356 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 RFTN2Q52LD8 501 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-217ENST00000553287 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-217ENST00000553287 WDR74Q6RFH5 385 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-217ENST00000553287 LRRC31Q6UY01 552 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 SPNS3Q6ZMD2 512 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 HSD11B1LQ7Z5J1 315 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 TMEM110Q86TL2 294 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 SETD3Q86TU7 594 aaPredicted RBP3.47□□□□□ -1.85
ATXN3-217ENST00000553287 CREBRFQ8IUR6 639 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 PYROXD2Q8N2H3 581 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 OR13C5Q8NGS8 318 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 OR10G6Q8NH81 332 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 MR1Q95460 341 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 NPY6RQ99463 290 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 GSDMCQ9BYG8 508 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 ZYG11BQ9C0D3 744 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 ABCG8Q9H221 673 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 CUEDC2Q9H467 287 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 TRIM10Q9UDY6 481 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 UBQLN2Q9UHD9 624 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 KIAA1257Q9ULG3 409 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 TRAF3IP3Q9Y228 551 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 FARSAQ9Y285 508 aaKnown RBP3.47□□□□□ -1.85
ATXN3-217ENST00000553287 SH3GLB1Q9Y371 365 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 KIF25-AS1Q9Y6Z4 181 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 CCDC88CQ9P219 2028 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 PIKFYVEQ9Y2I7 2098 aa3.47□□□□□ -1.85
ATXN3-217ENST00000553287 ACANP16112 2415 aa3.46□□□□□ -1.85
ATXN3-217ENST00000553287 IGHV5-51A0A0C4DH38 117 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 C2orf92A0A1B0GVN3 265 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 P2RX6O15547 441 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 KDELR3O43731 214 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 SCO2O43819 266 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 HSF2BPO75031 334 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 IGSF6O95976 241 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 F10P00742 488 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 HCKP08631 526 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 SLC2A3P11169 496 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 TRIM23P36406 574 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 PRKCIP41743 596 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 ACADSBP45954 432 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 YWHAEP62258 255 aaKnown RBP3.46□□□□□ -1.86
ATXN3-217ENST00000553287 PPIAP62937 165 aaKnown RBP3.46□□□□□ -1.86
ATXN3-217ENST00000553287 NDPQ00604 133 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 TLE4Q04727 773 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 ELP6Q0PNE2 266 aa3.46□□□□□ -1.86
ATXN3-217ENST00000553287 CEACAM7Q14002 265 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms