RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 C1QTNF12Q5T7M4 302 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 ANXA8L1Q5VT79 327 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 SAXO2Q658L1 398 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 CYB5R2Q6BCY4 276 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 TNFAIP8L2Q6P589 184 aaPredicted RBP8.23□□□□□ -1.09
CHD8-203ENST00000553283 EMBQ6PCB8 327 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 FRRS1Q6ZNA5 592 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 ARFGAP2Q8N6H7 521 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 ZNF525Q8N782 197 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 WDR31Q8NA23 367 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 VPS37AQ8NEZ2 397 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 OR52E4Q8NGH9 312 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 OR4A15Q8NGL6 344 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 C10orf105Q8TEF2 133 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 NANOS1Q8WY41 292 aaKnown RBP8.23□□□□□ -1.09
CHD8-203ENST00000553283 FAM168AQ92567 244 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 PROX1Q92786 737 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 PMM1Q92871 262 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 RAB8BQ92930 207 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 ROPN1LQ96C74 230 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 DNAJA3Q96EY1 480 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 BEX2Q9BXY8 128 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 AMBRA1Q9C0C7 1298 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 OR11A1Q9GZK7 315 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 AKTIPQ9H8T0 292 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 FKRPQ9H9S5 495 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 EXOSC3Q9NQT5 275 aaKnown RBP8.23□□□□□ -1.09
CHD8-203ENST00000553283 TMEM181Q9P2C4 612 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 LGALS13Q9UHV8 139 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 DCTN4Q9UJW0 460 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 ATP23Q9Y6H3 246 aa8.23□□□□□ -1.09
CHD8-203ENST00000553283 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.22□□□□□ -1.096e-7■■■□□ 15.2
CHD8-203ENST00000553283 TMED7-TICAM2A0A0A6YYA0 188 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 PRAMEF27A3QJZ7 478 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 CLDN24A6NM45 220 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 ZNF208O43345 1280 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 EIF1BO60739 113 aaKnown RBP8.22□□□□□ -1.09
CHD8-203ENST00000553283 CPSF4O95639 269 aaKnown RBP8.22□□□□□ -1.09
CHD8-203ENST00000553283 F12P00748 615 aaPredicted RBP8.22□□□□□ -1.09
CHD8-203ENST00000553283 CSF3P09919 207 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 USF1P22415 310 aaPredicted RBP8.22□□□□□ -1.09
CHD8-203ENST00000553283 APOBEC3AP31941 199 aaPredicted RBP8.22□□□□□ -1.09
CHD8-203ENST00000553283 IDH2P48735 452 aaKnown RBP8.22□□□□□ -1.09
CHD8-203ENST00000553283 MAP2K6P52564 334 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 TGFBR3Q03167 851 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 PLAURQ03405 335 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 FUT5Q11128 374 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 CASP12Q6UXS9 341 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 ANKRD46Q86W74 232 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 NUDCD3Q8IVD9 361 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 C17orf78Q8N4C9 275 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 C1orf162Q8NEQ5 155 aaPredicted RBP8.22□□□□□ -1.09
CHD8-203ENST00000553283 CNOT9Q92600 299 aaKnown RBP8.22□□□□□ -1.09
CHD8-203ENST00000553283 TESCQ96BS2 214 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 DDIT4LQ96D03 193 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 NEURL3Q96EH8 262 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 NAA11Q9BSU3 229 aaPredicted RBP8.22□□□□□ -1.09
CHD8-203ENST00000553283 ROPN1BQ9BZX4 212 aaPredicted RBP8.22□□□□□ -1.09
CHD8-203ENST00000553283 DPY30Q9C005 99 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 MANSC1Q9H8J5 431 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 ROPN1Q9HAT0 212 aaPredicted RBP8.22□□□□□ -1.09
CHD8-203ENST00000553283 SLC17A5Q9NRA2 495 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 SLC7A10Q9NS82 523 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 UPB1Q9UBR1 384 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 LPAR3Q9UBY5 353 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 OSGIN1Q9UJX0 560 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 SLC9A8Q9Y2E8 581 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 AMDHD2Q9Y303 409 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 TMED7Q9Y3B3 224 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 FLVCR1Q9Y5Y0 555 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 PMF1-BGLAPU3KQ54 211 aa8.22□□□□□ -1.09
CHD8-203ENST00000553283 TMEM72A0PK05 275 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 AGAP5A6NIR3 686 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 AP3D1O14617 1153 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 ITM2AO43736 263 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 TYROBPO43914 113 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 IGHV4-31P0DP07 118 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 IMPDH2P12268 514 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 CREB1P16220 341 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 TACR3P29371 465 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 THBS2P35442 1172 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 SLC1A3P43003 542 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 ETV4P43268 484 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 KHKP50053 298 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 POLR2HP52434 150 aaKnown RBP8.21□□□□□ -1.1
CHD8-203ENST00000553283 PRPS1P60891 318 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 LSM11P83369 360 aaKnown RBP eCLIP8.21□□□□□ -1.1
CHD8-203ENST00000553283 IFFO1Q0D2I5 559 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 CASP8Q14790 479 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 SLC17A1Q14916 467 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 MST1LQ2TV78 715 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 GPAT3Q53EU6 434 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 TSPO2Q5TGU0 170 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 C9orf135Q5VTT2 229 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 HMGN2P46Q86SG4 172 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 CMIPQ8IY22 773 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 TMEM45BQ96B21 275 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 PPP1R36Q96LQ0 422 aa8.21□□□□□ -1.1
CHD8-203ENST00000553283 TRNT1Q96Q11 434 aaKnown RBP8.21□□□□□ -1.1
CHD8-203ENST00000553283 SHARPINQ9H0F6 387 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms