RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 VEGFCP49767 419 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 PLK1P53350 603 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 ENPEPQ07075 957 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 PRR4Q16378 134 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 ISXQ2M1V0 245 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 TIMM50Q3ZCQ8 353 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 HIGD2BQ4VC39 106 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 CARD17Q5XLA6 110 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 RNASEKQ6P5S7 137 aaKnown RBP3.84□□□□□ -1.79
SCFD1-209ENST00000553280 DNM1P46Q6ZS02 220 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 CADM2Q8N3J6 435 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 SPATA4Q8NEY3 305 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 OR1L6Q8NGR2 347 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 OR56B4Q8NH76 319 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 HAVCR1Q96D42 359 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 SERAC1Q96JX3 654 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 IFT74Q96LB3 600 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 NOL4LQ96MY1 436 aaPredicted RBP3.84□□□□□ -1.79
SCFD1-209ENST00000553280 TBX15Q96SF7 602 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 FMO2Q99518 471 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 NMRAL1Q9HBL8 299 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 KLHL28Q9NXS3 571 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 IKZF2Q9UKS7 526 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 PEX16Q9Y5Y5 336 aa3.84□□□□□ -1.79
SCFD1-209ENST00000553280 A0A075B6Q4 140 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 IQANK1A0A1B0GTG1 560 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 SMIM28A0A1B0GU29 152 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 A0A1W2PPV9 198 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 A8MXQ7 604 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 ZNF354AO60765 605 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-209ENST00000553280 SLITRK3O94933 977 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 GAPDHP04406 335 aaKnown RBP3.83□□□□□ -1.8
SCFD1-209ENST00000553280 PABPC4LP0CB38 370 aaKnown RBP3.83□□□□□ -1.8
SCFD1-209ENST00000553280 IGLL1P15814 213 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 CALCRP30988 508 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 RDXP35241 583 aaKnown RBP3.83□□□□□ -1.8
SCFD1-209ENST00000553280 PKNOX1P55347 436 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 PLP1P60201 277 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 ASPHQ12797 758 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 ARL6IP1Q15041 203 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 ZNF77Q15935 545 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 DUSP7Q16829 419 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 Q1RN00 199 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 SBK1Q52WX2 424 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 CARD16Q5EG05 197 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 OR2B11Q5JQS5 317 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 TMEM107Q6UX40 140 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 CXCL17Q6UXB2 119 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 ACOT7LQ6ZUV0 252 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 GPR137CQ8N3F9 429 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.83□□□□□ -1.8
SCFD1-209ENST00000553280 CEP112Q8N8E3 955 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 SETD7Q8WTS6 366 aaKnown RBP3.83□□□□□ -1.8
SCFD1-209ENST00000553280 RAPGEF5Q92565 580 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 SEC22AQ96IW7 307 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 KCNA7Q96RP8 456 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 CNN2Q99439 309 aaKnown RBP3.83□□□□□ -1.8
SCFD1-209ENST00000553280 RNF126Q9BV68 326 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 PPA2Q9H2U2 334 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 NARFLQ9H6Q4 476 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 RSPH14Q9UHP6 348 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 CSDC2Q9Y534 153 aaKnown RBP3.83□□□□□ -1.8
SCFD1-209ENST00000553280 SNED1Q8TER0 1413 aa3.83□□□□□ -1.8
SCFD1-209ENST00000553280 PLEKHH1Q9ULM0 1364 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 TTC21BQ7Z4L5 1316 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 ABCD4O14678 606 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 HSD17B6O14756 317 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 RNF13O43567 381 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 KITLGP21583 273 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 VDAC1P21796 283 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 CCDC173Q0VFZ6 552 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 OXA1LQ15070 435 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 PPP1R7Q15435 360 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 AANATQ16613 207 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 LRRC36Q1X8D7 754 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 EIPR1Q53HC9 387 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 XKR7Q5GH72 579 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 RAET1LQ5VY80 246 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 RNLSQ5VYX0 342 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 CGB2Q6NT52 195 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 GDPD3Q7L5L3 318 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 NRMQ8IXM6 262 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 SDR9C7Q8NEX9 313 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 OR2L2Q8NH16 312 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 GTSF1Q8WW33 167 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 UFD1Q92890 307 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 ZNF641Q96N77 438 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-209ENST00000553280 OXGR1Q96P68 337 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 MAPKAP1Q9BPZ7 522 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 RBKSQ9H477 322 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 NEK6Q9HC98 313 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 FLVCR1Q9Y5Y0 555 aa3.82□□□□□ -1.8
SCFD1-209ENST00000553280 IGLV8-61A0A075B6I0 122 aa3.81□□□□□ -1.8
SCFD1-209ENST00000553280 A0A1B0GU03 582 aa3.81□□□□□ -1.8
SCFD1-209ENST00000553280 GFYI3L273 518 aa3.81□□□□□ -1.8
SCFD1-209ENST00000553280 DCTN6O00399 190 aa3.81□□□□□ -1.8
SCFD1-209ENST00000553280 KRT14P02533 472 aa3.81□□□□□ -1.8
SCFD1-209ENST00000553280 FASP25445 335 aa3.81□□□□□ -1.8
SCFD1-209ENST00000553280 GDF1P27539 372 aa3.81□□□□□ -1.8
SCFD1-209ENST00000553280 IL12AP29459 219 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms