RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 SH3BGRLO75368 114 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 SLC43A1O75387 559 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 TIPRLO75663 272 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 STK16O75716 305 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 NDUFA7O95182 113 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 SLU7O95391 586 aaKnown RBP4.45□□□□□ -1.7
CKAP4-203ENST00000553039 PCNAP12004 261 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 NPR2P20594 1047 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 COX5AP20674 150 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 CTNNA1P35221 906 aaKnown RBP4.45□□□□□ -1.7
CKAP4-203ENST00000553039 GDF5P43026 501 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 VPS41P49754 854 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 EMDP50402 254 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 ATP4BP51164 291 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 PRKAA2P54646 552 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 RAG2P55895 527 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 RAC3P60763 192 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 PHEXP78562 749 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 MRPS11P82912 194 aaKnown RBP4.45□□□□□ -1.7
CKAP4-203ENST00000553039 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.45□□□□□ -1.7
CKAP4-203ENST00000553039 STX5Q13190 355 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 CHIT1Q13231 466 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 ADIPOQQ15848 244 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 GABRA6Q16445 453 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 BAK1Q16611 211 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 DECR1Q16698 335 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 ZNF628Q5EBL2 1059 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 CDKL4Q5MAI5 379 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 C11orf63Q6NUN7 778 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 KLHL24Q6TFL4 600 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 FRA10AC1Q70Z53 315 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 ADGRG3Q86Y34 549 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 SYCE1Q8N0S2 351 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 RIBC1Q8N443 379 aaPredicted RBP4.45□□□□□ -1.7
CKAP4-203ENST00000553039 C17orf78Q8N4C9 275 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 MNS1Q8NEH6 495 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 OR52R1Q8NGF1 315 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 ACTRT2Q8TDY3 377 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 RNF138Q8WVD3 245 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 POP5Q969H6 163 aaKnown RBP4.45□□□□□ -1.7
CKAP4-203ENST00000553039 WDR34Q96EX3 536 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 KLHL15Q96M94 604 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 ZNF416Q9BWM5 594 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 TBL1XR1Q9BZK7 514 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 C11orf54Q9H0W9 315 aaPredicted RBP4.45□□□□□ -1.7
CKAP4-203ENST00000553039 OR51B5Q9H339 312 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 NARFLQ9H6Q4 476 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 DDX31Q9H8H2 851 aaKnown RBP4.45□□□□□ -1.7
CKAP4-203ENST00000553039 MOV10Q9HCE1 1003 aaKnown RBP4.45□□□□□ -1.7
CKAP4-203ENST00000553039 IARS2Q9NSE4 1012 aaKnown RBP4.45□□□□□ -1.7
CKAP4-203ENST00000553039 C20orf96Q9NUD7 363 aaPredicted RBP4.45□□□□□ -1.7
CKAP4-203ENST00000553039 FAM120CQ9NX05 1096 aaKnown RBP4.45□□□□□ -1.7
CKAP4-203ENST00000553039 AHSPQ9NZD4 102 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 EMC3Q9P0I2 261 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 NKX1-2Q9UD57 310 aaPredicted RBP4.45□□□□□ -1.7
CKAP4-203ENST00000553039 ZNF639Q9UID6 485 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 TFR2Q9UP52 801 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 RNF114Q9Y508 228 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 ZNF780BQ9Y6R6 833 aa4.45□□□□□ -1.7
CKAP4-203ENST00000553039 KMT2CQ8NEZ4 4911 aaKnown RBP4.45□□□□□ -1.7
CKAP4-203ENST00000553039 IGLV3-32A0A0A0MS00 114 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 A0A1W2PR80 420 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 C9JVG2 144 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 LYNX1G3V0Z9 82 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 hCG_2039718K7EN88 272 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 GPR171O14626 319 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 LIASO43766 372 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 XPNPEP2O43895 674 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 DOK2O60496 412 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 CLPXO76031 633 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 SEC14L2O76054 403 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 SCGB1D1O95968 90 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 OPN1MWP04001 364 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 ATP1B1P05026 303 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 ADRA2AP08913 450 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 CT45A8P0DMV1 189 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 CT45A9P0DMV2 189 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 OPN1MW2P0DN77 364 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 OPN1MW3P0DN78 364 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 LYNX1P0DP58 116 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 GYPEP15421 78 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 TCP1P17987 556 aaKnown RBP4.44□□□□□ -1.7
CKAP4-203ENST00000553039 COL8A2P25067 703 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 GGT5P36269 586 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 GDNFP39905 211 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 MARCKSL1P49006 195 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 ZNF41P51814 821 aaPredicted RBP4.44□□□□□ -1.7
CKAP4-203ENST00000553039 POU3F1Q03052 451 aaPredicted RBP4.44□□□□□ -1.7
CKAP4-203ENST00000553039 CKAP4Q07065 602 aaKnown RBP4.44□□□□□ -1.7
CKAP4-203ENST00000553039 CSTF3Q12996 717 aaKnown RBP4.44□□□□□ -1.7
CKAP4-203ENST00000553039 SLC29A2Q14542 456 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 EXOSC7Q15024 291 aaKnown RBP4.44□□□□□ -1.7
CKAP4-203ENST00000553039 TAF11Q15544 211 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 ZNF239Q16600 458 aaKnown RBP4.44□□□□□ -1.7
CKAP4-203ENST00000553039 WHAMMP3Q1A5X7 153 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 MSMPQ1L6U9 139 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 ERCC6LQ2NKX8 1250 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 PRICKLE4Q2TBC4 344 aa4.44□□□□□ -1.7
CKAP4-203ENST00000553039 TMEM176BQ3YBM2 270 aaPredicted RBP4.44□□□□□ -1.7
CKAP4-203ENST00000553039 MMEL1Q495T6 779 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms