RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 ACSL5Q9ULC5 683 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 BRWD1Q9NSI6 2320 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 ABHD14A-ACY1A0A1B0GW23 586 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 A0A1W2PR48 441 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 IGLON5A6NGN9 336 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 OR6C65A6NJZ3 312 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 OR5K4A6NMS3 321 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 OR52A4PA6NMU1 304 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 PRR32B1ATL7 298 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 KRBOX1C9JBD0 128 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 GPR31O00270 319 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 SPINT1O43278 529 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 SDC3O75056 442 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 B3GALNT1O75752 331 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 OR2A4O95047 310 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 LATS1O95835 1130 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 HPP00738 406 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 GLAP06280 429 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 HTR2AP28223 471 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 ACADLP28330 430 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 ERVK-25P63136 954 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 SLC7A9P82251 487 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 MAT1AQ00266 395 aaKnown RBP4.48□□□□□ -1.69
LIMA1-214ENST00000552783 ID2Q02363 134 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 CRMP1Q14194 572 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 MAPK14Q16539 360 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 MPP7Q5T2T1 576 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 YOD1Q5VVQ6 348 aaPredicted RBP4.48□□□□□ -1.69
LIMA1-214ENST00000552783 ELP2Q6IA86 826 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 MTSS1LQ765P7 747 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 CBLN2Q8IUK8 224 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 SLC16A11Q8NCK7 471 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 DNAAF1Q8NEP3 725 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 OR9A2Q8NGT5 310 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 OR51A7Q8NH64 312 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 OR14C36Q8NHC7 312 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 SCARB1Q8WTV0 552 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 ACOT11Q8WXI4 607 aaPredicted RBP4.48□□□□□ -1.69
LIMA1-214ENST00000552783 PELI1Q96FA3 418 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 LCORQ96JN0 433 aaPredicted RBP4.48□□□□□ -1.69
LIMA1-214ENST00000552783 OR2A7Q96R45 310 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 OR7D2Q96RA2 312 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 C12orf57Q99622 126 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 MCHR1Q99705 422 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 ARHGDIGQ99819 225 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 DPYSL5Q9BPU6 564 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 SLC6A17Q9H1V8 727 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 FN3KQ9H479 309 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 CD93Q9NPY3 652 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 CAMK2AQ9UQM7 478 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 KLF2Q9Y5W3 355 aaPredicted RBP4.48□□□□□ -1.69
LIMA1-214ENST00000552783 TRPM6Q9BX84 2022 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 WDR87Q6ZQQ6 2873 aa4.48□□□□□ -1.69
LIMA1-214ENST00000552783 KIAA1549LQ6ZVL6 1849 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 TBC1D3DA0A087WVF3 549 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 TBC1D3IA0A087WXS9 549 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 TBC1D3EA0A087X179 549 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 TBC1D3KA0A087X1G2 549 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 A0A1B0GUH1 482 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 TBC1D3FA6NER0 549 aaPredicted RBP4.47□□□□□ -1.69
LIMA1-214ENST00000552783 TBC1D3LB9A6J9 549 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 D6RAR5 112 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 MAN2B1O00754 1011 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 HIST1H2ABP04908 130 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 SBK2P0C263 348 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 TBC1D3HP0C7X1 549 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 F3P13726 295 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 MPIP34949 423 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 NAA10P41227 235 aaPredicted RBP4.47□□□□□ -1.69
LIMA1-214ENST00000552783 ZNF136P52737 540 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 RAG2P55895 527 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 DYRK1AQ13627 763 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 BEX5Q5H9J7 111 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 SLC22A10Q63ZE4 541 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 TBC1D3GQ6DHY5 549 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 MRM1Q6IN84 353 aaKnown RBP4.47□□□□□ -1.69
LIMA1-214ENST00000552783 TBC1D3CQ6IPX1 549 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 FAM111BQ6SJ93 734 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 HIST3H2AQ7L7L0 130 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 BIVMQ86UB2 503 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 ADIPOR2Q86V24 386 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 TBC1D3Q8IZP1 549 aaPredicted RBP4.47□□□□□ -1.69
LIMA1-214ENST00000552783 MEIOBQ8N635 442 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 ZNF433Q8N7K0 673 aaPredicted RBP4.47□□□□□ -1.69
LIMA1-214ENST00000552783 BPIFCQ8NFQ6 507 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 ZNF671Q8TAW3 534 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 ASB12Q8WXK4 309 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 SMPDL3BQ92485 455 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 HIST1H2ACQ93077 130 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 ZNF689Q96CS4 500 aaPredicted RBP4.47□□□□□ -1.69
LIMA1-214ENST00000552783 ZMYND19Q96E35 227 aaPredicted RBP4.47□□□□□ -1.69
LIMA1-214ENST00000552783 SLC35A4Q96G79 324 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 GINS4Q9BRT9 223 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 NDC1Q9BTX1 674 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 TMEM106CQ9BVX2 250 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 JAM3Q9BX67 310 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 CPEB1Q9BZB8 566 aaKnown RBP4.47□□□□□ -1.69
LIMA1-214ENST00000552783 KCNK15Q9H427 330 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 TRPV4Q9HBA0 871 aa4.47□□□□□ -1.69
LIMA1-214ENST00000552783 BARX1Q9HBU1 254 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms