RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 TRIM2Q9C040 744 aa16.51■□□□□ 0.23
PRPF40B-216ENST00000552301 GALNT8Q9NY28 637 aa16.51■□□□□ 0.23
PRPF40B-216ENST00000552301 TMEM181Q9P2C4 612 aa16.51■□□□□ 0.23
PRPF40B-216ENST00000552301 CACNA1DQ01668 2161 aa16.51■□□□□ 0.23
PRPF40B-216ENST00000552301 ELOA3DA6NLF2 546 aaPredicted RBP16.5■□□□□ 0.23
PRPF40B-216ENST00000552301 A8MXE2 369 aa16.5■□□□□ 0.23
PRPF40B-216ENST00000552301 DNPH1O43598 174 aa16.5■□□□□ 0.23
PRPF40B-216ENST00000552301 CD8BP10966 210 aa16.5■□□□□ 0.23
PRPF40B-216ENST00000552301 AGTR1P30556 359 aa16.5■□□□□ 0.23
PRPF40B-216ENST00000552301 GZMMP51124 257 aa16.5■□□□□ 0.23
PRPF40B-216ENST00000552301 SORDQ00796 357 aa16.5■□□□□ 0.23
PRPF40B-216ENST00000552301 GUSBP1Q15486 140 aa16.5■□□□□ 0.23
PRPF40B-216ENST00000552301 ELOA3BQ3SY89 546 aa16.5■□□□□ 0.23
PRPF40B-216ENST00000552301 GLIPR1L2Q4G1C9 344 aa16.5■□□□□ 0.23
PRPF40B-216ENST00000552301 STK32CQ86UX6 486 aa16.5■□□□□ 0.23
PRPF40B-216ENST00000552301 ELOA3Q8NG57 546 aa16.5■□□□□ 0.23
PRPF40B-216ENST00000552301 RNF217Q8TC41 542 aa16.5■□□□□ 0.23
PRPF40B-216ENST00000552301 C3orf49Q96BT1 292 aa16.5■□□□□ 0.23
PRPF40B-216ENST00000552301 LRRC37BQ96QE4 947 aa16.5■□□□□ 0.23
PRPF40B-216ENST00000552301 HOPXQ9BPY8 73 aaPredicted RBP16.5■□□□□ 0.23
PRPF40B-216ENST00000552301 ZNF559Q9BR84 538 aa16.5■□□□□ 0.23
PRPF40B-216ENST00000552301 OPN3Q9H1Y3 402 aaPredicted RBP16.5■□□□□ 0.23
PRPF40B-216ENST00000552301 TMEM27Q9HBJ8 222 aa16.5■□□□□ 0.23
PRPF40B-216ENST00000552301 GP6Q9HCN6 339 aa16.5■□□□□ 0.23
PRPF40B-216ENST00000552301 FANCFQ9NPI8 374 aa16.5■□□□□ 0.23
PRPF40B-216ENST00000552301 KLHL13Q9P2N7 655 aa16.5■□□□□ 0.23
PRPF40B-216ENST00000552301 UNC79Q9P2D8 2635 aa16.5■□□□□ 0.23
PRPF40B-216ENST00000552301 CCT8L1PA6NM43 557 aa16.49■□□□□ 0.23
PRPF40B-216ENST00000552301 NDUFAB1O14561 156 aa16.49■□□□□ 0.23
PRPF40B-216ENST00000552301 SMAD9O15198 467 aaKnown RBP16.49■□□□□ 0.23
PRPF40B-216ENST00000552301 IFNA14P01570 189 aa16.49■□□□□ 0.23
PRPF40B-216ENST00000552301 SSTR2P30874 369 aa16.49■□□□□ 0.23
PRPF40B-216ENST00000552301 IDUAP35475 653 aa16.49■□□□□ 0.23
PRPF40B-216ENST00000552301 KIR2DL3P43628 341 aa16.49■□□□□ 0.23
PRPF40B-216ENST00000552301 SLC35A1P78382 337 aa16.49■□□□□ 0.23
PRPF40B-216ENST00000552301 RASGEF1BQ0VAM2 473 aa16.49■□□□□ 0.23
PRPF40B-216ENST00000552301 VEZF1Q14119 521 aa16.49■□□□□ 0.23
PRPF40B-216ENST00000552301 HACD2Q6Y1H2 254 aa16.49■□□□□ 0.23
PRPF40B-216ENST00000552301 PIGWQ7Z7B1 504 aa16.49■□□□□ 0.23
PRPF40B-216ENST00000552301 DNAJA4Q8WW22 397 aaPredicted RBP16.49■□□□□ 0.23
PRPF40B-216ENST00000552301 TAMM41Q96BW9 452 aa16.49■□□□□ 0.23
PRPF40B-216ENST00000552301 ZNF583Q96ND8 569 aa16.49■□□□□ 0.23
PRPF40B-216ENST00000552301 TAPBPLQ9BX59 468 aa16.49■□□□□ 0.23
PRPF40B-216ENST00000552301 C12orf49Q9H741 205 aa16.49■□□□□ 0.23
PRPF40B-216ENST00000552301 EMC3Q9P0I2 261 aa16.49■□□□□ 0.23
PRPF40B-216ENST00000552301 KCNN3Q9UGI6 736 aa16.49■□□□□ 0.23
PRPF40B-216ENST00000552301 TRAPPC4Q9Y296 219 aa16.49■□□□□ 0.23
PRPF40B-216ENST00000552301 ANKHD1Q8IWZ3 2542 aaKnown RBP16.49■□□□□ 0.23
PRPF40B-216ENST00000552301 A0A1B0GWA3 101 aa16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 ZC3H12DA2A288 527 aaKnown RBP16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 TUBAL3A6NHL2 446 aa16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 A8MVM7 634 aa16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 M0R3H8 397 aa16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 EIF1BO60739 113 aaKnown RBP16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 CYTIPO60759 359 aa16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 AHSA1O95433 338 aa16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 C8BP07358 591 aa16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 POU2F1P14859 743 aa16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 SLC7A2P52569 658 aa16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 BNIP2Q12982 314 aa16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 SNTB1Q13884 538 aaKnown RBP16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 ALG10BQ5I7T1 473 aa16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 GKAP1Q5VSY0 366 aaPredicted RBP16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 CCDC80Q76M96 950 aa16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 ATG4DQ86TL0 474 aaPredicted RBP16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 COMTD1Q86VU5 262 aa16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 TUSC5Q8IXB3 177 aa16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 MICU2Q8IYU8 434 aa16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 PIGXQ8TBF5 258 aa16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 PROX1Q92786 737 aa16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 CCT8L2Q96SF2 557 aa16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 GPATCH1Q9BRR8 931 aaKnown RBP16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 NAA11Q9BSU3 229 aaPredicted RBP16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 POTEKPQ9BYX7 375 aa16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 SLC9A8Q9Y2E8 581 aa16.48■□□□□ 0.23
PRPF40B-216ENST00000552301 ELOVL7A1L3X0 281 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 GCM2O75603 506 aaPredicted RBP16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 LGI1O95970 557 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 GPIP06744 558 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 YES1P07947 543 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 PNMTP11086 282 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 HTR2AP28223 471 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 CD79BP40259 229 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 LIPEQ05469 1076 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 DUSP7Q16829 419 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 EXOC3L2Q2M3D2 409 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 LRRC23Q53EV4 343 aaPredicted RBP16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 FAM91A1Q658Y4 838 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 ULK3Q6PHR2 472 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 SLC15A3Q8IY34 581 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 LSMEM1Q8N8F7 131 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 ZNF610Q8N9Z0 462 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 VANGL1Q8TAA9 524 aaPredicted RBP16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 STK35Q8TDR2 534 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 C14orf79Q96F83 325 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 SLC47A1Q96FL8 570 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 ARHGDIGQ99819 225 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 PSD2Q9BQI7 771 aa16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 RSPO3Q9BXY4 272 aaPredicted RBP16.47■□□□□ 0.23
PRPF40B-216ENST00000552301 C12orf10Q9HB07 376 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms