RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 CDK9P50750 372 aaKnown RBP5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 SLC37A1P57057 533 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 SLC26A5P58743 744 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 KRTAP10-11P60412 298 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 AP2B1P63010 937 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 EEF1A2Q05639 463 aaKnown RBP5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 HSPB3Q12988 150 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 CYLC2Q14093 348 aaPredicted RBP5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 LTB4RQ15722 352 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 CHRFAM7AQ494W8 412 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 TRMT12Q53H54 448 aaKnown RBP5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 PAGE3Q5JUK9 113 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 H3F3CQ6NXT2 135 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 ZCCHC12Q6PEW1 402 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 SLC2A7Q6PXP3 512 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 C6orf89Q6UWU4 347 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 TMEM107Q6UX40 140 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 ANKRD46Q86W74 232 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 SNX32Q86XE0 403 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 SIAH3Q8IW03 269 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 TRIML2Q8N7C3 387 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 ZNF615Q8N8J6 731 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 PCYOX1LQ8NBM8 494 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 APCDD1LQ8NCL9 501 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 MAPK1IP1LQ8NDC0 245 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 SEMA6DQ8NFY4 1073 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 OR7G2Q8NG99 324 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 OR4A15Q8NGL6 344 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 OR8K3Q8NH51 312 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 M1APQ8TC57 530 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 SFXN5Q8TD22 340 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 ELP5Q8TE02 316 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 DPF1Q92782 380 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 HAS2Q92819 552 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 ROPN1LQ96C74 230 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 VMP1Q96GC9 406 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 SENP5Q96HI0 755 aaPredicted RBP5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 INPP5KQ9BT40 448 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 PAIP1Q9H074 479 aaKnown RBP5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 EFCAB1Q9HAE3 211 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 C3orf14Q9HBI5 128 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 MMP25Q9NPA2 562 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 COPS7AQ9UBW8 275 aa5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 LEF1Q9UJU2 399 aaPredicted RBP5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 C19orf53Q9UNZ5 99 aaPredicted RBP5.84□□□□□ -1.47
DEPDC4-210ENST00000551642 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 LOC100653049A0A140TA62 436 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 MBD3L4A6NDZ8 208 aaPredicted RBP5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 DNAJC9-AS1A6NH13 148 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 MBD3L5A6NJ08 208 aaPredicted RBP5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 TTC36A6NLP5 189 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 CCT8L1PA6NM43 557 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 A8MUA0 341 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 NPIPA5E9PKD4 350 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 UPK1AO00322 258 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 MRASO14807 208 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 COQ9O75208 318 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 KRT34O76011 436 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 SOX30O94993 753 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 CPSF4O95639 269 aaKnown RBP5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 IL33O95760 270 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 SERPINA7P05543 415 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 ABCB1P08183 1280 aaPredicted RBP5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 ABOP16442 354 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 EFNA1P20827 205 aaPredicted RBP5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 CALB2P22676 271 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 UQCRC2P22695 453 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 PTGER1P34995 402 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 MAP3K8P41279 467 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 CDKN2CP42773 168 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 CCT3P49368 545 aaKnown RBP5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 EMDP50402 254 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 CLCN2P51788 898 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 MNAT1P51948 309 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 TXNL4AP83876 142 aaKnown RBP5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 GABPB1Q06547 395 aaPredicted RBP5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 SRSF4Q08170 494 aaKnown RBP5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 ZNF267Q14586 743 aaPredicted RBP5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 BTBD16Q32M84 506 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 TRMT5Q32P41 509 aaKnown RBP5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 MMEL1Q495T6 779 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 KRTCAP3Q53RY4 240 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 C6orf10Q5SRN2 563 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 SAXO2Q658L1 398 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 REP15Q6BDI9 236 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 SUMO4Q6EEV6 95 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 DLEU7Q6UYE1 221 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 HACD2Q6Y1H2 254 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 HSDL2Q6YN16 418 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 ZNF621Q6ZSS3 439 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 C1QL2Q7Z5L3 287 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 AMIGO2Q86SJ2 522 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 ZBTB46Q86UZ6 589 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 LIX1LQ8IVB5 337 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 C17orf47Q8NEP4 570 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 NUBPLQ8TB37 319 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 MIPOL1Q8TD10 442 aa5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 BRIX1Q8TDN6 353 aaKnown RBP5.83□□□□□ -1.48
DEPDC4-210ENST00000551642 KAT2AQ92830 837 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 289.2 ms