RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 DEFB113Q30KQ7 82 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 KLHL26Q53HC5 615 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 ODF2Q5BJF6 829 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 NHSL2Q5HYW2 709 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 C6orf136Q5SQH8 315 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 RIPPLY2Q5TAB7 128 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 PRR27Q6MZM9 219 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 UGT3A1Q6NUS8 523 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 MFSD12Q6NUT3 480 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 PRSS57Q6UWY2 283 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 RAD9BQ6WBX8 426 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 SPATA19Q7Z5L4 167 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 CCDC91Q7Z6B0 441 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 BIVMQ86UB2 503 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 RPS19BP1Q86WX3 136 aaKnown RBP2.09□□□□□ -2.07
CPSF6-207ENST00000551516 PLD3Q8IV08 490 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 VSTM4Q8IW00 320 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 PHC2Q8IXK0 858 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 GPALPP1Q8IXQ4 340 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 PRSS58Q8IYP2 241 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 RCOR2Q8IZ40 523 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 TMEM251Q8N6I4 163 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 CSNK1A1LQ8N752 337 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 DNAAF3Q8N9W5 541 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 OR5M8Q8NGP6 311 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 OR9A1PQ8NGU1 263 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 OR51Q1Q8NH59 317 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 LILRB1Q8NHL6 650 aaPredicted RBP2.09□□□□□ -2.07
CPSF6-207ENST00000551516 GDAP1Q8TB36 358 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 NT5CQ8TCD5 201 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 CD200R1Q8TD46 325 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 CCDC107Q8WV48 283 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 SLCO2A1Q92959 643 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 SPSB1Q96BD6 273 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 ANKRD9Q96BM1 317 aaPredicted RBP2.09□□□□□ -2.07
CPSF6-207ENST00000551516 LINGO1Q96FE5 620 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 MED30Q96HR3 178 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 HES6Q96HZ4 224 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 C18orf12Q96KH6 178 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 CNDP1Q96KN2 507 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 DUX5Q96PT3 197 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 FEVQ99581 238 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 TBL1YQ9BQ87 522 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 SELENOSQ9BQE4 189 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 GPATCH1Q9BRR8 931 aaKnown RBP2.09□□□□□ -2.07
CPSF6-207ENST00000551516 KRTAP9-8Q9BYQ0 159 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 OSBPL8Q9BZF1 889 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 COPS7BQ9H9Q2 264 aaPredicted RBP2.09□□□□□ -2.07
CPSF6-207ENST00000551516 NHEJ1Q9H9Q4 299 aaPredicted RBP2.09□□□□□ -2.07
CPSF6-207ENST00000551516 ACKR4Q9NPB9 350 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 ABCF3Q9NUQ8 709 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 ZNF701Q9NV72 531 aaPredicted RBP2.09□□□□□ -2.07
CPSF6-207ENST00000551516 ANO10Q9NW15 660 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 CHMP5Q9NZZ3 219 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 SPATA7Q9P0W8 599 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 TRPC4Q9UBN4 977 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 FETUBQ9UGM5 382 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 LCMT1Q9UIC8 334 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 GNPTGQ9UJJ9 305 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 PDE10AQ9Y233 779 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 DLGAP4Q9Y2H0 992 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 CHCHD2Q9Y6H1 151 aaPredicted RBP2.09□□□□□ -2.07
CPSF6-207ENST00000551516 MPDZO75970 2070 aa2.09□□□□□ -2.07
CPSF6-207ENST00000551516 NOTCH1P46531 2555 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 NUP210LQ5VU65 1888 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 CADP27708 2225 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 IGHV4OR15-8A0A075B7B6 117 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 TEX13DA0A0J9YY54 714 aaPredicted RBP2.08□□□□□ -2.08
CPSF6-207ENST00000551516 SAGE2PA6NJ88 616 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 OR6C76A6NM76 312 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 WASHC1A8K0Z3 465 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 H3BMM5 538 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 SGK494L7N484 410 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 CHST10O43529 356 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 SYNGR3O43761 229 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 NIPSNAP2O75323 286 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 CRLF1O75462 422 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 OR6B1O95007 311 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 SCELO95171 688 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 SIX3O95343 332 aaPredicted RBP2.08□□□□□ -2.08
CPSF6-207ENST00000551516 TGDSO95455 350 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 ETHE1O95571 254 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 EPPINO95925 133 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 IGHV2-70P01814 119 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 SLC4A1P02730 911 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 GBAP04062 536 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 C8orf89P0DMQ9 161 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 ICAM2P13598 275 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 HLA-DOBP13765 273 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 EZRP15311 586 aaKnown RBP2.08□□□□□ -2.08
CPSF6-207ENST00000551516 IL1RNP18510 177 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 IL10P22301 178 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 CBLP22681 906 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 TLX1P31314 330 aaPredicted RBP2.08□□□□□ -2.08
CPSF6-207ENST00000551516 RPL22P35268 128 aaKnown RBP2.08□□□□□ -2.08
CPSF6-207ENST00000551516 TIMP3P35625 211 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 RFC3P40938 356 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 XCR1P46094 333 aa2.08□□□□□ -2.08
CPSF6-207ENST00000551516 RPL21P46778 160 aaKnown RBP2.08□□□□□ -2.08
CPSF6-207ENST00000551516 SLC6A12P48065 614 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms