RNA–Protein interactions for RNA: ENST00000551160.5

BEST3-210, Transcript of bestrophin 3, humanhuman

TSL 3 BASIC

Gene BEST3, Length 721 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-210ENST00000551160 C1QTNF12Q5T7M4 302 aa8.81□□□□□ -1
BEST3-210ENST00000551160 ZCCHC12Q6PEW1 402 aa8.81□□□□□ -1
BEST3-210ENST00000551160 ZDHHC24Q6UX98 284 aa8.81□□□□□ -1
BEST3-210ENST00000551160 OR4F15Q8NGB8 312 aa8.81□□□□□ -1
BEST3-210ENST00000551160 FAM76AQ8TAV0 307 aa8.81□□□□□ -1
BEST3-210ENST00000551160 PPCDCQ96CD2 204 aa8.81□□□□□ -1
BEST3-210ENST00000551160 DUX5Q96PT3 197 aa8.81□□□□□ -1
BEST3-210ENST00000551160 PKP2Q99959 881 aa8.81□□□□□ -1
BEST3-210ENST00000551160 CCDC106Q9BWC9 280 aa8.81□□□□□ -1
BEST3-210ENST00000551160 TMPRSS13Q9BYE2 586 aa8.81□□□□□ -1
BEST3-210ENST00000551160 OBP2BQ9NPH6 170 aa8.81□□□□□ -1
BEST3-210ENST00000551160 ZCCHC3Q9NUD5 404 aaKnown RBP8.81□□□□□ -1
BEST3-210ENST00000551160 DDX28Q9NUL7 540 aaKnown RBP8.81□□□□□ -1
BEST3-210ENST00000551160 ACER3Q9NUN7 267 aa8.81□□□□□ -1
BEST3-210ENST00000551160 SH3BP4Q9P0V3 963 aa8.81□□□□□ -1
BEST3-210ENST00000551160 CRNNQ9UBG3 495 aaPredicted RBP8.81□□□□□ -1
BEST3-210ENST00000551160 CHRNA9Q9UGM1 479 aa8.81□□□□□ -1
BEST3-210ENST00000551160 WBP11Q9Y2W2 641 aaKnown RBP8.81□□□□□ -1
BEST3-210ENST00000551160 HEATR1Q9H583 2144 aaKnown RBP8.81□□□□□ -1
BEST3-210ENST00000551160 A0A096LPE4 126 aa8.8□□□□□ -1
BEST3-210ENST00000551160 A0A1W2PPZ6 126 aa8.8□□□□□ -1
BEST3-210ENST00000551160 SERTM1A2A2V5 107 aa8.8□□□□□ -1
BEST3-210ENST00000551160 FAM187AA6NFU0 413 aa8.8□□□□□ -1
BEST3-210ENST00000551160 OR6C65A6NJZ3 312 aa8.8□□□□□ -1
BEST3-210ENST00000551160 IGLV1-44P01699 117 aa8.8□□□□□ -1
BEST3-210ENST00000551160 HPXP02790 462 aa8.8□□□□□ -1
BEST3-210ENST00000551160 NUDT17P0C025 328 aa8.8□□□□□ -1
BEST3-210ENST00000551160 UBTFL6P0CB48 400 aaPredicted RBP8.8□□□□□ -1
BEST3-210ENST00000551160 TCN1P20061 433 aaPredicted RBP8.8□□□□□ -1
BEST3-210ENST00000551160 CCNA2P20248 432 aa8.8□□□□□ -1
BEST3-210ENST00000551160 COL8A2P25067 703 aa8.8□□□□□ -1
BEST3-210ENST00000551160 PKNOX1P55347 436 aa8.8□□□□□ -1
BEST3-210ENST00000551160 UBE2NP61088 152 aaKnown RBP8.8□□□□□ -1
BEST3-210ENST00000551160 H3F3AP84243 136 aa8.8□□□□□ -1
BEST3-210ENST00000551160 SLC17A1Q14916 467 aa8.8□□□□□ -1
BEST3-210ENST00000551160 MSMPQ1L6U9 139 aa8.8□□□□□ -1
BEST3-210ENST00000551160 OLIG3Q7RTU3 272 aa8.8□□□□□ -1
BEST3-210ENST00000551160 TEX29Q8N6K0 151 aa8.8□□□□□ -1
BEST3-210ENST00000551160 OR1K1Q8NGR3 316 aa8.8□□□□□ -1
BEST3-210ENST00000551160 CLHC1Q8NHS4 586 aa8.8□□□□□ -1
BEST3-210ENST00000551160 RNF217Q8TC41 542 aa8.8□□□□□ -1
BEST3-210ENST00000551160 YIPF5Q969M3 257 aa8.8□□□□□ -1
BEST3-210ENST00000551160 ZNF764Q96H86 408 aaPredicted RBP8.8□□□□□ -1
BEST3-210ENST00000551160 ZNF385AQ96PM9 386 aaKnown RBP8.8□□□□□ -1
BEST3-210ENST00000551160 ALKBH3Q96Q83 286 aaPredicted RBP8.8□□□□□ -1
BEST3-210ENST00000551160 LAT2Q9GZY6 243 aa8.8□□□□□ -1
BEST3-210ENST00000551160 IQCGQ9H095 443 aaKnown RBP8.8□□□□□ -1
BEST3-210ENST00000551160 ACSS1Q9NUB1 689 aaPredicted RBP8.8□□□□□ -1
BEST3-210ENST00000551160 PARPBPQ9NWS1 579 aa8.8□□□□□ -1
BEST3-210ENST00000551160 KCNE5Q9UJ90 142 aa8.8□□□□□ -1
BEST3-210ENST00000551160 HDGFL3Q9Y3E1 203 aa8.8□□□□□ -1
BEST3-210ENST00000551160 CORINQ9Y5Q5 1042 aa8.8□□□□□ -1
BEST3-210ENST00000551160 CMYA5Q8N3K9 4069 aa8.79□□□□□ -1
BEST3-210ENST00000551160 ARPC4-TTLL3A0A0A6YYG9 625 aa8.79□□□□□ -1
BEST3-210ENST00000551160 IGHV2OR16-5A0A0B4J2B6 119 aa8.79□□□□□ -1
BEST3-210ENST00000551160 CCDC151A5D8V7 595 aa8.79□□□□□ -1
BEST3-210ENST00000551160 DNPH1O43598 174 aa8.79□□□□□ -1
BEST3-210ENST00000551160 RSL1D1O76021 490 aaKnown RBP8.79□□□□□ -1
BEST3-210ENST00000551160 PDE7AQ13946 482 aa8.79□□□□□ -1
BEST3-210ENST00000551160 KIAA0040Q15053 153 aa8.79□□□□□ -1
BEST3-210ENST00000551160 LINGO2Q7L985 606 aa8.79□□□□□ -1
BEST3-210ENST00000551160 AAED1Q7RTV5 226 aa8.79□□□□□ -1
BEST3-210ENST00000551160 TRIM46Q7Z4K8 759 aa8.79□□□□□ -1
BEST3-210ENST00000551160 SIGLECL1Q8N7X8 197 aa8.79□□□□□ -1
BEST3-210ENST00000551160 ZIC4Q8N9L1 334 aa8.79□□□□□ -1
BEST3-210ENST00000551160 TMEM234Q8WY98 164 aa8.79□□□□□ -1
BEST3-210ENST00000551160 BCL2L2Q92843 193 aaPredicted RBP8.79□□□□□ -1
BEST3-210ENST00000551160 TMEM45BQ96B21 275 aa8.79□□□□□ -1
BEST3-210ENST00000551160 AURKBQ96GD4 344 aaPredicted RBP8.79□□□□□ -1
BEST3-210ENST00000551160 BOD1Q96IK1 185 aa8.79□□□□□ -1
BEST3-210ENST00000551160 ANKRD27Q96NW4 1050 aa8.79□□□□□ -1
BEST3-210ENST00000551160 TSSK3Q96PN8 268 aa8.79□□□□□ -1
BEST3-210ENST00000551160 NELFAQ9H3P2 528 aa8.79□□□□□ -1
BEST3-210ENST00000551160 REEP4Q9H6H4 257 aa8.79□□□□□ -1
BEST3-210ENST00000551160 ACSS3Q9H6R3 686 aa8.79□□□□□ -1
BEST3-210ENST00000551160 TNFRSF12AQ9NP84 129 aa8.79□□□□□ -1
BEST3-210ENST00000551160 MID1IP1Q9NPA3 183 aa8.79□□□□□ -1
BEST3-210ENST00000551160 SLC52A3Q9NQ40 469 aa8.79□□□□□ -1
BEST3-210ENST00000551160 ZNF275Q9NSD4 429 aaPredicted RBP8.79□□□□□ -1
BEST3-210ENST00000551160 GPATCH2Q9NW75 528 aa8.79□□□□□ -1
BEST3-210ENST00000551160 TMEM45AQ9NWC5 275 aa8.79□□□□□ -1
BEST3-210ENST00000551160 MED29Q9NX70 200 aa8.79□□□□□ -1
BEST3-210ENST00000551160 ZDHHC2Q9UIJ5 367 aa8.79□□□□□ -1
BEST3-210ENST00000551160 STK38LQ9Y2H1 464 aa8.79□□□□□ -1
BEST3-210ENST00000551160 CCL27Q9Y4X3 112 aa8.79□□□□□ -1
BEST3-210ENST00000551160 SPIN1Q9Y657 262 aaPredicted RBP8.79□□□□□ -1
BEST3-210ENST00000551160 KMT2CQ8NEZ4 4911 aaKnown RBP8.79□□□□□ -1
BEST3-210ENST00000551160 A0A0G2JMP0 313 aa8.78□□□□□ -1
BEST3-210ENST00000551160 A0A0X1KG70 313 aa8.78□□□□□ -1
BEST3-210ENST00000551160 DNAJC9-AS1A6NH13 148 aa8.78□□□□□ -1
BEST3-210ENST00000551160 PPIHO43447 177 aaKnown RBP8.78□□□□□ -1
BEST3-210ENST00000551160 PLPP2O43688 288 aa8.78□□□□□ -1
BEST3-210ENST00000551160 TBX19O60806 448 aa8.78□□□□□ -1
BEST3-210ENST00000551160 NCR1O76036 304 aa8.78□□□□□ -1
BEST3-210ENST00000551160 PRSS23O95084 383 aa8.78□□□□□ -1
BEST3-210ENST00000551160 MPZL1O95297 269 aa8.78□□□□□ -1
BEST3-210ENST00000551160 CSTAP01040 98 aa8.78□□□□□ -1
BEST3-210ENST00000551160 IGKV3-15P01624 115 aa8.78□□□□□ -1
BEST3-210ENST00000551160 IMPDH2P12268 514 aa8.78□□□□□ -1
BEST3-210ENST00000551160 SDC1P18827 310 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms