RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 PTPN6P29350 595 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 ALDH3A1P30838 453 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 HOXD3P31249 432 aaPredicted RBP4.37□□□□□ -1.71
SCAF11-214ENST00000550893 FEN1P39748 380 aaKnown RBP4.37□□□□□ -1.71
SCAF11-214ENST00000550893 ZFP36L2P47974 494 aaKnown RBP4.37□□□□□ -1.71
SCAF11-214ENST00000550893 PCYT1AP49585 367 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 NUP107P57740 925 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 DNAJB13P59910 316 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 ZP1P60852 638 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 PLIN5Q00G26 463 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 ACTN3Q08043 901 aaPredicted RBP4.37□□□□□ -1.71
SCAF11-214ENST00000550893 CRYZQ08257 329 aaKnown RBP4.37□□□□□ -1.71
SCAF11-214ENST00000550893 CSTF3Q12996 717 aaKnown RBP4.37□□□□□ -1.71
SCAF11-214ENST00000550893 SERTAD2Q14140 314 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 ZNF630Q2M218 657 aaPredicted RBP4.37□□□□□ -1.71
SCAF11-214ENST00000550893 AP5B1Q2VPB7 878 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 ANKRD26P1Q6NSI1 321 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 TMEM81Q6P7N7 255 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 IL20RBQ6UXL0 311 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 APOOLQ6UXV4 268 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 HSDL2Q6YN16 418 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 ZCCHC23Q6ZST2 131 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 Q6ZSV7 163 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 GPRIN3Q6ZVF9 776 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 MYLK4Q86YV6 388 aaPredicted RBP4.37□□□□□ -1.71
SCAF11-214ENST00000550893 IFT20Q8IY31 132 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 TBC1D19Q8N5T2 526 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 WDSUB1Q8N9V3 476 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 TMEM178AQ8NBL3 297 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 MNS1Q8NEH6 495 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 C17orf47Q8NEP4 570 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 SPPL2AQ8TCT8 520 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 C16orf78Q8WTQ4 265 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 PHF10Q8WUB8 498 aaKnown RBP4.37□□□□□ -1.71
SCAF11-214ENST00000550893 TANKQ92844 425 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 UBE2E3Q969T4 207 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 MTBPQ96DY7 904 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 APOPT1Q96IL0 206 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 SERPINI1Q99574 410 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 TMEM109Q9BVC6 243 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 SHCBP1LQ9BZQ2 653 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 COPS7BQ9H9Q2 264 aaPredicted RBP4.37□□□□□ -1.71
SCAF11-214ENST00000550893 MYNNQ9NPC7 610 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 AGPAT4Q9NRZ5 378 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 PHF11Q9UIL8 331 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 SH3BGRL2Q9UJC5 107 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 TMCO1Q9UM00 188 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 ENTPD4Q9Y227 616 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 DNAJC15Q9Y5T4 150 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 ABCA2Q9BZC7 2435 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 CADP27708 2225 aa4.37□□□□□ -1.71
SCAF11-214ENST00000550893 A0A0A0MQY5 61 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 SMIM23A6NLE4 172 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 PRSS44E7EML9 344 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 UPK1AO00322 258 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 CCL21O00585 134 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 PCDH7O60245 1069 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 KLHL41O60662 606 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 SCN2BO60939 215 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 SMIM24O75264 130 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 GLRA3O75311 464 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 LYPLA1O75608 230 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-214ENST00000550893 ERAL1O75616 437 aaKnown RBP4.36□□□□□ -1.71
SCAF11-214ENST00000550893 SUPT7LO94864 414 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 OTCP00480 354 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 HPNP05981 417 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 ACP2P11117 423 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 HSD3B1P14060 373 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 CASP3P42574 277 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 CDK9P50750 372 aaKnown RBP4.36□□□□□ -1.71
SCAF11-214ENST00000550893 XKP51811 444 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 PKNOX1P55347 436 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 PPIAP62937 165 aaKnown RBP4.36□□□□□ -1.71
SCAF11-214ENST00000550893 SKP1P63208 163 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 OC90Q02509 493 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-214ENST00000550893 FUT5Q11128 374 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 ART3Q13508 389 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 GUSBP1Q15486 140 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 TMEM44Q2T9K0 475 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 GXYLT1Q4G148 440 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 RFTN2Q52LD8 501 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-214ENST00000550893 RTL4Q6ZR62 310 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 RINLQ6ZS11 566 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 ZNF367Q7RTV3 350 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 LCA5Q86VQ0 697 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 CCDC71Q8IV32 467 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-214ENST00000550893 RIMKLAQ8IXN7 391 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 GPALPP1Q8IXQ4 340 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 GHDCQ8N2G8 530 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 HORMAD2Q8N7B1 307 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 POGLUT1Q8NBL1 392 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 OR52R1Q8NGF1 315 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 SELENOMQ8WWX9 145 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 ANP32BQ92688 251 aaKnown RBP4.36□□□□□ -1.71
SCAF11-214ENST00000550893 DAZLQ92904 295 aaKnown RBP4.36□□□□□ -1.71
SCAF11-214ENST00000550893 CIDECQ96AQ7 238 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-214ENST00000550893 PKNOX2Q96KN3 472 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 RILPQ96NA2 401 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 DGAT2Q96PD7 388 aa4.36□□□□□ -1.71
SCAF11-214ENST00000550893 FAM111AQ96PZ2 611 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms