RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 BAIAP2L2Q6UXY1 529 aa3.7□□□□□ -1.82
LIMA1-205ENST00000550592 TYMSOSQ8TAI1 123 aa3.7□□□□□ -1.82
LIMA1-205ENST00000550592 CCT8L2Q96SF2 557 aa3.7□□□□□ -1.82
LIMA1-205ENST00000550592 CLMPQ9H6B4 373 aa3.7□□□□□ -1.82
LIMA1-205ENST00000550592 RPS10P5Q9NQ39 176 aa3.7□□□□□ -1.82
LIMA1-205ENST00000550592 MRPL39Q9NYK5 338 aaKnown RBP3.7□□□□□ -1.82
LIMA1-205ENST00000550592 CHRNA9Q9UGM1 479 aa3.7□□□□□ -1.82
LIMA1-205ENST00000550592 CRLS1Q9UJA2 301 aa3.7□□□□□ -1.82
LIMA1-205ENST00000550592 ANAPC7Q9UJX3 599 aa3.7□□□□□ -1.82
LIMA1-205ENST00000550592 GSTK1Q9Y2Q3 226 aa3.7□□□□□ -1.82
LIMA1-205ENST00000550592 ZNFX1Q9P2E3 1918 aaKnown RBP3.7□□□□□ -1.82
LIMA1-205ENST00000550592 GON4LQ3T8J9 2241 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 IGKV3D-20A0A0C4DH25 116 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 IGHV3-35A0A0C4DH35 117 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 PPIAL4DF5H284 164 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 CPLX1O14810 134 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 TBX19O60806 448 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 DUSP14O95147 198 aaKnown RBP3.69□□□□□ -1.82
LIMA1-205ENST00000550592 IGF1P05019 195 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 CLUP10909 449 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 PDHBP11177 359 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 XCR1P46094 333 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 RND3P61587 244 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 RPL8P62917 257 aaKnown RBP3.69□□□□□ -1.82
LIMA1-205ENST00000550592 CXCL6P80162 114 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 NUCB2P80303 420 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 CNTN2Q02246 1040 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 ZNF154Q13106 437 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 TGIF1Q15583 401 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 CHI3L2Q15782 390 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 TATDN3Q17R31 274 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 CCDC57Q2TAC2 916 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 SLC25A30Q5SVS4 291 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 CGB2Q6NT52 195 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 ZNF774Q6NX45 483 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 CES3Q6UWW8 571 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 DPY19L4Q7Z388 723 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 ZDHHC21Q8IVQ6 265 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 C9orf40Q8IXQ3 194 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 LYG1Q8N1E2 194 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 CSNK1A1LQ8N752 337 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 ZNF540Q8NDQ6 660 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 RHOXF1Q8NHV9 184 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 OSTF1Q92882 214 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 MYLPFQ96A32 169 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 TMEM80Q96HE8 168 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 ELOVL4Q9GZR5 314 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 RAB33BQ9H082 229 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 DPM3Q9P2X0 92 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 SLC2A6Q9UGQ3 507 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 RAB23Q9ULC3 237 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 NAALAD2Q9Y3Q0 740 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 L3MBTL1Q9Y468 752 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 COL11A1P12107 1806 aaPredicted RBP3.69□□□□□ -1.82
LIMA1-205ENST00000550592 MAPK8IP3Q9UPT6 1336 aa3.69□□□□□ -1.82
LIMA1-205ENST00000550592 PIEZO2Q9H5I5 2752 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 GSAPA4D1B5 854 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 C5orf67F2Z3F1 127 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 STX7O15400 261 aaKnown RBP3.68□□□□□ -1.82
LIMA1-205ENST00000550592 GPAA1O43292 621 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 OR1F1O43749 312 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 SLC25A27O95847 323 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 THY1P04216 161 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 RETP07949 1114 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 SLC35E2P0CK97 266 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 NT5EP21589 574 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 IGHV1-2P23083 117 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 FASP25445 335 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 ATP5A1P25705 553 aaKnown RBP3.68□□□□□ -1.82
LIMA1-205ENST00000550592 OTX2P32243 289 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 MAGEA5P43359 124 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 BDKRB1P46663 353 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 GNPDA1P46926 289 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 SLC25A1P53007 311 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 BEX3Q00994 111 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 BDH1Q02338 343 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 RGS1Q08116 209 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 PEX6Q13608 980 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 KCNJ11Q14654 390 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 MAPK6Q16659 721 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 TEX44Q53QW1 395 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 RABGAP1LQ5R372 815 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 PVRIGQ6DKI7 326 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 C2orf66Q6UXQ4 117 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 HPS6Q86YV9 775 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 ARL6IP6Q8N6S5 226 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 KLHL30-AS1Q8NEE0 82 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 OR9A4Q8NGU2 314 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 M1APQ8TC57 530 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 GTSF1Q8WW33 167 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 SPRYD4Q8WW59 207 aaPredicted RBP3.68□□□□□ -1.82
LIMA1-205ENST00000550592 IL1F10Q8WWZ1 152 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 VPS39Q96JC1 886 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 CFAP53Q96M91 514 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 DPH7Q9BTV6 452 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 ZNF107Q9UII5 783 aaPredicted RBP3.68□□□□□ -1.82
LIMA1-205ENST00000550592 FRYQ5TBA9 3013 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 NOTCH2Q04721 2471 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 RALGAPA1Q6GYQ0 2036 aa3.68□□□□□ -1.82
LIMA1-205ENST00000550592 MYH3P11055 1940 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms