RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 SLC6A5Q9Y345 797 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 C2orf72A6NCS6 295 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 SLC22A31A6NKX4 558 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 ARSBP15848 533 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 RAB3BP20337 219 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 AQP2P41181 271 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 ARL4DP49703 201 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 GFERP55789 205 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 GPR176Q14439 515 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 LEG1Q6P5S2 330 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 PRR23CQ6ZRP0 262 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 RTL10Q7L3V2 364 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 VASH1Q7L8A9 365 aaPredicted RBP12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 ZNRF4Q8WWF5 429 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 ADOQ96SZ5 270 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 ZNF350Q9GZX5 532 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 APBB3O95704 486 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 AGR2O95994 175 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 OR8G3PP0DMU2 310 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 GDI2P50395 445 aaKnown RBP12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 ASAH1Q13510 395 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 LYPD8Q6UX82 237 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 UBE2Q1Q7Z7E8 422 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 MCATQ8IVS2 390 aaKnown RBP12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 SAMD14Q8IZD0 417 aaPredicted RBP12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 SETD6Q8TBK2 473 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 ZDHHC1Q8WTX9 485 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 HSD17B8Q92506 261 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 IRF2BPLQ9H1B7 796 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 AUNIPQ9H7T9 357 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 MKKSQ9NPJ1 570 aaPredicted RBP12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 PRTFDC1Q9NRG1 225 aa12.59□□□□□ -0.39
PRPF40B-209ENST00000548825 TEX13CA0A0J9YWL9 993 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 ELOA3DA6NLF2 546 aaPredicted RBP12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 GALR3O60755 368 aaPredicted RBP12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 FZD7O75084 574 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 MAS1P04201 325 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 ENDOUP21128 410 aaKnown RBP12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 ADH7P40394 386 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 FCN2Q15485 313 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 PRICKLE4Q2TBC4 344 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 ELOA3BQ3SY89 546 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 VASNQ6EMK4 673 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 SLC22A18ASQ8N1D0 253 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 CA13Q8N1Q1 262 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 KDM8Q8N371 416 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 ELOA3Q8NG57 546 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 CEP76Q8TAP6 659 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 THEM6Q8WUY1 208 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 Q9N2J8 555 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 ATXN7L1Q9ULK2 861 aaPredicted RBP12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 SLC35A3Q9Y2D2 325 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 BHLHE40O14503 412 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 CBX7O95931 251 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 OPN1LWP04000 364 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 PSG6Q00889 435 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 METAP1DQ6UB28 335 aaPredicted RBP12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 CBLN3Q6UW01 205 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 ZNF321PQ8N8H1 164 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 MOSPD2Q8NHP6 518 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 DNAJA4Q8WW22 397 aaPredicted RBP12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 SNAPC3Q92966 411 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 FOLH1BQ9HBA9 442 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 PILRAQ9UKJ1 303 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 FLVCR2Q9UPI3 526 aa12.58□□□□□ -0.4
PRPF40B-209ENST00000548825 TMEM72A0PK05 275 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 F8A1P23610 371 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 SLC6A6P31641 620 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 BAHD1Q8TBE0 780 aaPredicted RBP12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 DEDD2Q8WXF8 326 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 MUC3AQ02505 3323 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 PTPRSQ13332 1948 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 A0A0J9YY10 115 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 OR2B3O76000 313 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 GABRG2P18507 467 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 S100A1P23297 94 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 PITPNBP48739 271 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 TMEM43Q9BTV4 400 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 CMC2Q9NRP2 79 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 POT1Q9NUX5 634 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 TRAPPC4Q9Y296 219 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 CYR61O00622 381 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 ADRB1P08588 477 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 AGFG1P52594 562 aaKnown RBP12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 GBX2P52951 348 aaPredicted RBP12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 EFNB1P98172 346 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 GALEQ14376 348 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 CDK10Q15131 360 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 SLC35D2Q76EJ3 337 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 OR6N2Q8NGY6 317 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 C16orf52Q8NHV5 167 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 CACNG6Q9BXT2 260 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 SPATA2Q9UM82 520 aa12.57□□□□□ -0.4
PRPF40B-209ENST00000548825 C2orf16Q68DN1 1984 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 CLDN4O14493 209 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 FABP7O15540 132 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 FLRT2O43155 660 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 HCRTR2O43614 444 aa12.56□□□□□ -0.4
PRPF40B-209ENST00000548825 BRINP1O60477 761 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms