RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 VPS39Q96JC1 886 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 ELMO2Q96JJ3 720 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 RIT2Q99578 217 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 TM2D1Q9BX74 207 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 ELOVL2Q9NXB9 296 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 EHFQ9NZC4 300 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 PRODH2Q9UF12 536 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 CYTH4Q9UIA0 394 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 LAMP5Q9UJQ1 280 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 ANGPTL2Q9UKU9 493 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 RABL2BQ9UNT1 228 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 CHMP2BQ9UQN3 213 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 KIF3AQ9Y496 699 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 MYH1P12882 1939 aa3.1□□□□□ -1.91
PTCH1-216ENST00000548379 SF3B1O75533 1304 aaKnown RBP eCLIP3.1□□□□□ -1.914e-7■■■■■ 133.7
PTCH1-216ENST00000548379 COL4A4P53420 1690 aaPredicted RBP3.1□□□□□ -1.91
PTCH1-216ENST00000548379 IGLV3-22A0A075B6J6 115 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 KLF18A0A0U1RQI7 1052 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 ARL5CA6NH57 179 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 G3V3Y1 287 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 CLDN5O00501 218 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 MAPK13O15264 365 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 CCL16O15467 120 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 TRAPPC3O43617 180 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 DUX1O43812 170 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 EFNA2O43921 213 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 N4BP1O75113 896 aaKnown RBP3.09□□□□□ -1.91
PTCH1-216ENST00000548379 ECI2O75521 394 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 SLC2A10O95528 541 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 MBD3O95983 291 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 IGFBP1P08833 259 aaPredicted RBP3.09□□□□□ -1.91
PTCH1-216ENST00000548379 ALPIP09923 528 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 H2AFZP0C0S5 128 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 CHMLP26374 656 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 ADSSP30520 456 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 HOXA9P31269 272 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 CXCL12P48061 93 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 KRTAP10-6P60371 365 aaPredicted RBP3.09□□□□□ -1.91
PTCH1-216ENST00000548379 ERVPABLB-1P60509 514 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 PSMC5P62195 406 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 IL18R1Q13478 541 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 HTR4Q13639 388 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 MXD4Q14582 209 aaPredicted RBP3.09□□□□□ -1.91
PTCH1-216ENST00000548379 CAMK4Q16566 473 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 CYP51A1Q16850 503 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 ZNF57Q68EA5 555 aaPredicted RBP3.09□□□□□ -1.91
PTCH1-216ENST00000548379 CGB2Q6NT52 195 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 SLC25A24Q6NUK1 477 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 ERICH1Q86X53 443 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 NAXDQ8IW45 347 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 BPIFB2Q8N4F0 458 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 OR10T2Q8NGX3 314 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 VN1R17PQ8TDU5 208 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 ADAMTS16Q8TE57 1224 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 TFB1MQ8WVM0 346 aaKnown RBP3.09□□□□□ -1.91
PTCH1-216ENST00000548379 GTSF1Q8WW33 167 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 ZNF606Q8WXB4 792 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 FAM3CQ92520 227 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 FGF13Q92913 245 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 FGF14Q92915 247 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 RAB7BQ96AH8 199 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 ZNF707Q96C28 371 aaPredicted RBP3.09□□□□□ -1.91
PTCH1-216ENST00000548379 MSANTD3Q96H12 275 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 DHTKD1Q96HY7 919 aaPredicted RBP3.09□□□□□ -1.91
PTCH1-216ENST00000548379 C4orf36Q96KX1 117 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 CEP170P1Q96L14 293 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 ZFP14Q9HCL3 533 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 TIGARQ9NQ88 270 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 UTP6Q9NYH9 597 aaKnown RBP3.09□□□□□ -1.91
PTCH1-216ENST00000548379 RDH8Q9NYR8 311 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 CGNQ9P2M7 1197 aaKnown RBP3.09□□□□□ -1.91
PTCH1-216ENST00000548379 ADAM28Q9UKQ2 775 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 NDRG2Q9UN36 371 aaKnown RBP3.09□□□□□ -1.91
PTCH1-216ENST00000548379 RRP15Q9Y3B9 282 aaKnown RBP3.09□□□□□ -1.91
PTCH1-216ENST00000548379 IKBKGQ9Y6K9 419 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 BDP1A6H8Y1 2624 aa3.09□□□□□ -1.91
PTCH1-216ENST00000548379 DOCK3Q8IZD9 2030 aa3.09□□□□□ -1.92
PTCH1-216ENST00000548379 IGKV6-21A0A0C4DH24 114 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 IGHV3-35A0A0C4DH35 117 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 CCT8L1PA6NM43 557 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 CDX4O14627 284 aaPredicted RBP3.08□□□□□ -1.92
PTCH1-216ENST00000548379 PRRG1O14668 218 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 CASKO14936 926 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 MSH4O15457 936 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 LATO43561 262 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 SRSF10O75494 262 aaKnown RBP3.08□□□□□ -1.92
PTCH1-216ENST00000548379 RHBDL1O75783 438 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 B3GAT3O94766 335 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 ANXA3P12429 323 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 KRT13P13646 458 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 DRD5P21918 477 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 YWHABP31946 246 aaKnown RBP3.08□□□□□ -1.92
PTCH1-216ENST00000548379 CDH5P33151 784 aaPredicted RBP3.08□□□□□ -1.92
PTCH1-216ENST00000548379 RDXP35241 583 aaKnown RBP3.08□□□□□ -1.92
PTCH1-216ENST00000548379 QARSP47897 775 aaKnown RBP3.08□□□□□ -1.92
PTCH1-216ENST00000548379 IST1P53990 364 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 KRTAP10-12P60413 245 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 PLOD1Q02809 727 aaPredicted RBP3.08□□□□□ -1.92
PTCH1-216ENST00000548379 LAMTOR4Q0VGL1 99 aa3.08□□□□□ -1.92
PTCH1-216ENST00000548379 PSMD5Q16401 504 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms