RNA–Protein interactions for RNA: ENST00000548259.1

VPS29-204, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-204ENST00000548259 CCT5P48643 541 aa14.75□□□□□ -0.05
VPS29-204ENST00000548259 FOXG1P55316 489 aaPredicted RBP14.75□□□□□ -0.05
VPS29-204ENST00000548259 UBE2NP61088 152 aaKnown RBP14.75□□□□□ -0.05
VPS29-204ENST00000548259 C16orf62Q7Z3J2 963 aa14.75□□□□□ -0.05
VPS29-204ENST00000548259 CCDC103Q8IW40 242 aa14.75□□□□□ -0.05
VPS29-204ENST00000548259 DDIASQ8IXT1 998 aa14.75□□□□□ -0.05
VPS29-204ENST00000548259 ZNF418Q8TF45 676 aaPredicted RBP14.75□□□□□ -0.05
VPS29-204ENST00000548259 GCDHQ92947 438 aaPredicted RBP14.75□□□□□ -0.05
VPS29-204ENST00000548259 DDIT4LQ96D03 193 aa14.75□□□□□ -0.05
VPS29-204ENST00000548259 SLC38A2Q96QD8 506 aa14.75□□□□□ -0.05
VPS29-204ENST00000548259 CCDC106Q9BWC9 280 aa14.75□□□□□ -0.05
VPS29-204ENST00000548259 SAP130Q9H0E3 1048 aa14.75□□□□□ -0.05
VPS29-204ENST00000548259 PSMC3IPQ9P2W1 217 aaPredicted RBP14.75□□□□□ -0.05
VPS29-204ENST00000548259 PCDHGB4Q9UN71 923 aa14.75□□□□□ -0.05
VPS29-204ENST00000548259 PTGDR2Q9Y5Y4 395 aa14.75□□□□□ -0.05
VPS29-204ENST00000548259 KCNE3Q9Y6H6 103 aa14.75□□□□□ -0.05
VPS29-204ENST00000548259 AGR2O95994 175 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 LAMP1P11279 417 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 CDH2P19022 906 aaPredicted RBP14.74□□□□□ -0.05
VPS29-204ENST00000548259 NTF4P34130 210 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 SOAT1P35610 550 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 DVL1P1P54792 670 aaPredicted RBP14.74□□□□□ -0.05
VPS29-204ENST00000548259 CDH15P55291 814 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 ETF1P62495 437 aaKnown RBP14.74□□□□□ -0.05
VPS29-204ENST00000548259 ZSWIM7Q19AV6 140 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 FAM153CQ494X1 144 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 ATAD3BQ5T9A4 648 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 TSPO2Q5TGU0 170 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 LIPMQ5VYY2 423 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 SHQ1Q6PI26 577 aaKnown RBP14.74□□□□□ -0.05
VPS29-204ENST00000548259 VHLLQ6RSH7 139 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 SYT10Q6XYQ8 523 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 RINLQ6ZS11 566 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 OR7A2PQ8NGA2 310 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 OR4F15Q8NGB8 312 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 OR2T11Q8NH01 316 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 ARL5BQ96KC2 179 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 PPP3R2Q96LZ3 170 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 ZNF317Q96PQ6 595 aaPredicted RBP14.74□□□□□ -0.05
VPS29-204ENST00000548259 SNX18Q96RF0 628 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 PLK3Q9H4B4 646 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 TNFRSF12AQ9NP84 129 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 TMEM45AQ9NWC5 275 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 OXSMQ9NWU1 459 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 MID2Q9UJV3 735 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 PYCARDQ9ULZ3 195 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 FLVCR1Q9Y5Y0 555 aa14.74□□□□□ -0.05
VPS29-204ENST00000548259 KLF11O14901 512 aa14.73□□□□□ -0.05
VPS29-204ENST00000548259 C6orf47O95873 294 aa14.73□□□□□ -0.05
VPS29-204ENST00000548259 CPA3P15088 417 aa14.73□□□□□ -0.05
VPS29-204ENST00000548259 IFNGR1P15260 489 aa14.73□□□□□ -0.05
VPS29-204ENST00000548259 MATN1P21941 496 aa14.73□□□□□ -0.05
VPS29-204ENST00000548259 RYKP34925 604 aa14.73□□□□□ -0.05
VPS29-204ENST00000548259 MAP2K6P52564 334 aa14.73□□□□□ -0.05
VPS29-204ENST00000548259 H3F3AP84243 136 aa14.73□□□□□ -0.05
VPS29-204ENST00000548259 SLC25A3Q00325 362 aa14.73□□□□□ -0.05
VPS29-204ENST00000548259 ADIPOQQ15848 244 aa14.73□□□□□ -0.05
VPS29-204ENST00000548259 ARHGAP11BQ3KRB8 267 aa14.73□□□□□ -0.05
VPS29-204ENST00000548259 TRMT10CQ7L0Y3 403 aaKnown RBP14.73□□□□□ -0.05
VPS29-204ENST00000548259 GLCCI1Q86VQ1 547 aa14.73□□□□□ -0.05
VPS29-204ENST00000548259 TEX29Q8N6K0 151 aa14.73□□□□□ -0.05
VPS29-204ENST00000548259 OR5D16Q8NGK9 328 aa14.73□□□□□ -0.05
VPS29-204ENST00000548259 WDR60Q8WVS4 1066 aa14.73□□□□□ -0.05
VPS29-204ENST00000548259 SOX7Q9BT81 388 aa14.73□□□□□ -0.05
VPS29-204ENST00000548259 METTL17Q9H7H0 456 aaPredicted RBP14.73□□□□□ -0.05
VPS29-204ENST00000548259 MKLN1Q9UL63 735 aa14.73□□□□□ -0.05
VPS29-204ENST00000548259 EMCNQ9ULC0 261 aa14.73□□□□□ -0.05
VPS29-204ENST00000548259 MGAM2Q2M2H8 2515 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 IGHV1-18A0A0C4DH31 117 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 OR6C65A6NJZ3 312 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 B4DSR2 109 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 UGT2B17O75795 530 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 PROCP04070 461 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 GCAP28676 217 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 COMPP49747 757 aaPredicted RBP14.72□□□□□ -0.05
VPS29-204ENST00000548259 SLC17A1Q14916 467 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 C3orf36Q3SXR2 165 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 FAM174BQ3ZCQ3 159 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 HIKESHIQ53FT3 197 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 AAED1Q7RTV5 226 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 ZNF786Q8N393 782 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 ARFGAP2Q8N6H7 521 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 OR5AK3PQ8NH89 298 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 TMEM45BQ96B21 275 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 DNAJA3Q96EY1 480 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 BOD1Q96IK1 185 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 ANKRD27Q96NW4 1050 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 OR11A1Q9GZK7 315 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 GRPEL1Q9HAV7 217 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 DYNLRB1Q9NP97 96 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 POLE3Q9NRF9 147 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 GRIP1Q9Y3R0 1128 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 MEGF8Q7Z7M0 2845 aa14.72□□□□□ -0.05
VPS29-204ENST00000548259 ZNF587BE7ETH6 402 aa14.71□□□□□ -0.05
VPS29-204ENST00000548259 ZNF208O43345 1280 aa14.71□□□□□ -0.05
VPS29-204ENST00000548259 PLIN3O60664 434 aa14.71□□□□□ -0.05
VPS29-204ENST00000548259 FCMRO60667 390 aa14.71□□□□□ -0.05
VPS29-204ENST00000548259 LILRA1O75019 489 aa14.71□□□□□ -0.05
VPS29-204ENST00000548259 VENTXO95231 258 aa14.71□□□□□ -0.05
VPS29-204ENST00000548259 UQCRBP14927 111 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms