RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 KCNF1Q9H3M0 494 aa11.69□□□□□ -0.54
CCDC59-202ENST00000547758 PARPBPQ9NWS1 579 aa11.69□□□□□ -0.54
CCDC59-202ENST00000547758 C1orf109Q9NX04 203 aa11.69□□□□□ -0.54
CCDC59-202ENST00000547758 CHRNA9Q9UGM1 479 aa11.69□□□□□ -0.54
CCDC59-202ENST00000547758 PCDHB10Q9UN67 800 aa11.69□□□□□ -0.54
CCDC59-202ENST00000547758 FAF1Q9UNN5 650 aaPredicted RBP11.69□□□□□ -0.54
CCDC59-202ENST00000547758 HDGFL3Q9Y3E1 203 aa11.69□□□□□ -0.54
CCDC59-202ENST00000547758 FLVCR1Q9Y5Y0 555 aa11.69□□□□□ -0.54
CCDC59-202ENST00000547758 H3BQF6 201 aa11.68□□□□□ -0.54
CCDC59-202ENST00000547758 GSTA1P08263 222 aa11.68□□□□□ -0.54
CCDC59-202ENST00000547758 KRT16P08779 473 aa11.68□□□□□ -0.54
CCDC59-202ENST00000547758 UBTFL6P0CB48 400 aaPredicted RBP11.68□□□□□ -0.54
CCDC59-202ENST00000547758 IFNGR1P15260 489 aa11.68□□□□□ -0.54
CCDC59-202ENST00000547758 CDH2P19022 906 aaPredicted RBP11.68□□□□□ -0.54
CCDC59-202ENST00000547758 APOBEC1P41238 236 aaKnown RBP11.68□□□□□ -0.54
CCDC59-202ENST00000547758 OR2B6P58173 313 aa11.68□□□□□ -0.54
CCDC59-202ENST00000547758 SHQ1Q6PI26 577 aaKnown RBP11.68□□□□□ -0.54
CCDC59-202ENST00000547758 USP43Q70EL4 1123 aa11.68□□□□□ -0.54
CCDC59-202ENST00000547758 ZCCHC24Q8N2G6 241 aaKnown RBP11.68□□□□□ -0.54
CCDC59-202ENST00000547758 OR56A1Q8NGH5 318 aa11.68□□□□□ -0.54
CCDC59-202ENST00000547758 UBASH3BQ8TF42 649 aa11.68□□□□□ -0.54
CCDC59-202ENST00000547758 MTERF3Q96E29 417 aa11.68□□□□□ -0.54
CCDC59-202ENST00000547758 CCDC106Q9BWC9 280 aa11.68□□□□□ -0.54
CCDC59-202ENST00000547758 NMUR2Q9GZQ4 415 aa11.68□□□□□ -0.54
CCDC59-202ENST00000547758 TNFRSF12AQ9NP84 129 aa11.68□□□□□ -0.54
CCDC59-202ENST00000547758 OBP2BQ9NPH6 170 aa11.68□□□□□ -0.54
CCDC59-202ENST00000547758 CTPS2Q9NRF8 586 aa11.68□□□□□ -0.54
CCDC59-202ENST00000547758 GPATCH2Q9NW75 528 aa11.68□□□□□ -0.54
CCDC59-202ENST00000547758 BAIAP2L1Q9UHR4 511 aa11.68□□□□□ -0.54
CCDC59-202ENST00000547758 SPEF1Q9Y4P9 236 aa11.68□□□□□ -0.54
CCDC59-202ENST00000547758 PTGDR2Q9Y5Y4 395 aa11.68□□□□□ -0.54
CCDC59-202ENST00000547758 hCG_2039718K7EN88 272 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 SLC28A1O00337 649 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 ANKRD28O15084 1053 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 CSTAP01040 98 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 UROSP10746 265 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 DDX5P17844 614 aaKnown RBP11.67□□□□□ -0.54
CCDC59-202ENST00000547758 CCT3P49368 545 aaKnown RBP11.67□□□□□ -0.54
CCDC59-202ENST00000547758 KHKP50053 298 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 ARFIP2P53365 341 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 H3F3AP84243 136 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 DEFA6Q01524 100 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 SLC7A5Q01650 507 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 NAAAQ02083 359 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 ZNF141Q15928 474 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 AWAT1Q58HT5 328 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 TIFABQ6ZNK6 161 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 FRMD7Q6ZUT3 714 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 R3HCC1LQ7Z5L2 792 aaKnown RBP11.67□□□□□ -0.54
CCDC59-202ENST00000547758 SVOPLQ8N434 492 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 TMEM186Q96B77 213 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 BOD1Q96IK1 185 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 OR7D2Q96RA2 312 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 SDF2Q99470 211 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 OR11A1Q9GZK7 315 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 ZNF696Q9H7X3 374 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 HIF1ANQ9NWT6 349 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 KCNE5Q9UJ90 142 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 GRIP1Q9Y3R0 1128 aa11.67□□□□□ -0.54
CCDC59-202ENST00000547758 CENPVL1A0A0U1RR11 272 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 TMPRSS2O15393 492 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 URI1O94763 535 aaPredicted RBP11.66□□□□□ -0.54
CCDC59-202ENST00000547758 FKBP2P26885 142 aaKnown RBP11.66□□□□□ -0.54
CCDC59-202ENST00000547758 ASMTP46597 345 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 LIMS1P48059 325 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 CLK1P49759 484 aaKnown RBP11.66□□□□□ -0.54
CCDC59-202ENST00000547758 NAA20P61599 178 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 RPL38P63173 70 aaKnown RBP11.66□□□□□ -0.54
CCDC59-202ENST00000547758 SLC17A1Q14916 467 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 GPR68Q15743 365 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 TBRG1Q3YBR2 411 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 SPDYE7PQ495Y7 208 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 CLEC6AQ6EIG7 209 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 GRINAQ7Z429 371 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 NUP37Q8NFH4 326 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 OR4F15Q8NGB8 312 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 OR5D16Q8NGK9 328 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 OR2T11Q8NH01 316 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 ZNF563Q8TA94 476 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 PSMA8Q8TAA3 256 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 CCDC126Q96EE4 140 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 JMJD8Q96S16 334 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 DOK1Q99704 481 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 ZNF442Q9H7R0 627 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 DYNLRB1Q9NP97 96 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 TMEM181Q9P2C4 612 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 CRNNQ9UBG3 495 aaPredicted RBP11.66□□□□□ -0.54
CCDC59-202ENST00000547758 USP22Q9UPT9 525 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 TRAPPC4Q9Y296 219 aa11.66□□□□□ -0.54
CCDC59-202ENST00000547758 A0A0G2JK05 382 aa11.65□□□□□ -0.54
CCDC59-202ENST00000547758 LYNX1G3V0Z9 82 aa11.65□□□□□ -0.54
CCDC59-202ENST00000547758 SCAMP2O15127 329 aaKnown RBP11.65□□□□□ -0.54
CCDC59-202ENST00000547758 EIF1BO60739 113 aaKnown RBP11.65□□□□□ -0.54
CCDC59-202ENST00000547758 UGT2B17O75795 530 aa11.65□□□□□ -0.54
CCDC59-202ENST00000547758 MSMBP08118 114 aa11.65□□□□□ -0.54
CCDC59-202ENST00000547758 CECR9P0C854 216 aa11.65□□□□□ -0.54
CCDC59-202ENST00000547758 LYNX1P0DP58 116 aa11.65□□□□□ -0.54
CCDC59-202ENST00000547758 NEFHP12036 1026 aa11.65□□□□□ -0.54
CCDC59-202ENST00000547758 NPR2P20594 1047 aa11.65□□□□□ -0.54
CCDC59-202ENST00000547758 EPHA1P21709 976 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms