RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 ODF4Q2M2E3 257 aa10.91□□□□□ -0.66
CCDC38-202ENST00000546386 FAM27D1Q5T7N8 215 aa10.91□□□□□ -0.66
CCDC38-202ENST00000546386 TAAR8Q969N4 342 aa10.91□□□□□ -0.66
CCDC38-202ENST00000546386 POM121Q96HA1 1249 aa10.91□□□□□ -0.66
CCDC38-202ENST00000546386 FAM86C1Q9NVL1 165 aa10.91□□□□□ -0.66
CCDC38-202ENST00000546386 QPCTLQ9NXS2 382 aa10.91□□□□□ -0.66
CCDC38-202ENST00000546386 PISDQ9UG56 409 aa10.91□□□□□ -0.66
CCDC38-202ENST00000546386 ENOPH1Q9UHY7 261 aa10.91□□□□□ -0.66
CCDC38-202ENST00000546386 ADGRG4Q8IZF6 3080 aa10.91□□□□□ -0.66
CCDC38-202ENST00000546386 CCDC163A0A0D9SF12 145 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 LINC00854A0A1B0GVQ3 168 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 SH3D21A4FU49 640 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 DOK2O60496 412 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 IL33O95760 270 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 LIMS3P0CW19 117 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 LIMS4P0CW20 117 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 STAT5AP42229 794 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 GPR143P51810 404 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 GAS1P54826 345 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 RPS25P62851 125 aaKnown RBP10.9□□□□□ -0.66
CCDC38-202ENST00000546386 PRKCDQ05655 676 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 TMED1Q13445 227 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 TUBA3CQ13748 450 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 DHRS13Q6UX07 377 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 IL20RBQ6UXL0 311 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 CD300LDQ6UXZ3 194 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 SLC46A3Q7Z3Q1 461 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 B4GALNT2Q8NHY0 566 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 FGF11Q92914 225 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 JSRP1Q96MG2 331 aaPredicted RBP10.9□□□□□ -0.66
CCDC38-202ENST00000546386 WDR77Q9BQA1 342 aaPredicted RBP10.9□□□□□ -0.66
CCDC38-202ENST00000546386 ASB6Q9NWX5 421 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 RPH3AQ9Y2J0 694 aaPredicted RBP10.9□□□□□ -0.66
CCDC38-202ENST00000546386 SIRT4Q9Y6E7 314 aaPredicted RBP10.9□□□□□ -0.66
CCDC38-202ENST00000546386 CD8B2A6NJW9 211 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 TMEM200CA6NKL6 621 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 DCTN6O00399 190 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 PRODHO43272 600 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 CLPXO76031 633 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 CER1O95813 267 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 AK1P00568 194 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 CD8BP10966 210 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 MYL12AP19105 171 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 EVI2BP34910 448 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 AADACL4Q5VUY2 407 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 SPATC1Q76KD6 591 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 SYT9Q86SS6 491 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 ATCAYQ86WG3 371 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 ZNF511Q8NB15 262 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 OR13C5Q8NGS8 318 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 SPRYD4Q8WW59 207 aaPredicted RBP10.9□□□□□ -0.66
CCDC38-202ENST00000546386 MVB12AQ96EY5 273 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 ARL5BQ96KC2 179 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 RPRD1BQ9NQG5 326 aaKnown RBP10.9□□□□□ -0.66
CCDC38-202ENST00000546386 SLC39A1Q9NY26 324 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 NPFFR2Q9Y5X5 522 aa10.9□□□□□ -0.66
CCDC38-202ENST00000546386 TEX13CA0A0J9YWL9 993 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 CTDSP2O14595 271 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 RGS5O15539 181 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 MPZL2O60487 215 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 LDOC1O95751 146 aaPredicted RBP10.89□□□□□ -0.67
CCDC38-202ENST00000546386 ACVR1BP36896 505 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 CENPAP49450 140 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 IRF3Q14653 427 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 COL28A1Q2UY09 1125 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 ZNF613Q6PF04 617 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 C16orf87Q6PH81 154 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 OVCH1Q7RTY7 1134 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 HOXB13Q92826 284 aaPredicted RBP10.89□□□□□ -0.67
CCDC38-202ENST00000546386 TRIM2Q9C040 744 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 GPN2Q9H9Y4 310 aaPredicted RBP10.89□□□□□ -0.67
CCDC38-202ENST00000546386 NANSQ9NR45 359 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 KLRF1Q9NZS2 232 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 MMACHCQ9Y4U1 282 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 MRPS18BQ9Y676 258 aaKnown RBP10.89□□□□□ -0.67
CCDC38-202ENST00000546386 DNAJC13O75165 2243 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 A0A087WUJ7 227 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 OR6C68A6NDL8 312 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 FRG2CA6NGY1 282 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 TVP23AA6NH52 213 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 PRR23D1E9PI22 279 aaPredicted RBP10.89□□□□□ -0.67
CCDC38-202ENST00000546386 SELENOFO60613 162 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 RAB36O95755 333 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 PRR23D2P0DMB1 279 aaPredicted RBP10.89□□□□□ -0.67
CCDC38-202ENST00000546386 HLA-DOBP13765 273 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 OTX2P32243 289 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 RPS19P39019 145 aaKnown RBP10.89□□□□□ -0.67
CCDC38-202ENST00000546386 GLYR1Q49A26 553 aaPredicted RBP10.89□□□□□ -0.67
CCDC38-202ENST00000546386 SLC23A3Q6PIS1 610 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 NANOGP1Q8N7R0 232 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 ZNF527Q8NB42 609 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 NAT6Q93015 286 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 ABTB1Q969K4 478 aaPredicted RBP10.89□□□□□ -0.67
CCDC38-202ENST00000546386 TEAD3Q99594 435 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 LPAR4Q99677 370 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 OSGIN1Q9UJX0 560 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 ZMIZ1Q9ULJ6 1067 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 PCDHGA3Q9Y5H0 932 aa10.89□□□□□ -0.67
CCDC38-202ENST00000546386 A0A1B0GVC2 190 aa10.88□□□□□ -0.67
CCDC38-202ENST00000546386 ANKRD61A6NGH8 418 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms