RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 ZNF888P0CJ79 500 aaPredicted RBP8.07□□□□□ -1.12
TDP1-204ENST00000545686 CLUP10909 449 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 CPMP14384 443 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 CTRB1P17538 263 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 TLX1P31314 330 aaPredicted RBP8.07□□□□□ -1.12
TDP1-204ENST00000545686 VEGFCP49767 419 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 POU6F2P78424 691 aaPredicted RBP8.07□□□□□ -1.12
TDP1-204ENST00000545686 LGALS3BPQ08380 585 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 IRF4Q15306 451 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 GAB4Q2WGN9 574 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 TP53I3Q53FA7 332 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 CTRB2Q6GPI1 263 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 KIAA1324Q6UXG2 1013 aaKnown RBP8.07□□□□□ -1.12
TDP1-204ENST00000545686 C3P1Q6ZMU1 363 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 ESPNLQ6ZVH7 1005 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 VN1R4Q7Z5H5 301 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 COX18Q8N8Q8 333 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 MRPL43Q8N983 215 aaKnown RBP8.07□□□□□ -1.12
TDP1-204ENST00000545686 RAB40AQ8WXH6 277 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 ARMC5Q96C12 935 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 OR14A2Q96R54 314 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 MYADMQ96S97 322 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 MEPEQ9NQ76 525 aaPredicted RBP8.07□□□□□ -1.12
TDP1-204ENST00000545686 RDH8Q9NYR8 311 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 TAS2R5Q9NYW4 299 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 HCN3Q9P1Z3 774 aa8.07□□□□□ -1.12
TDP1-204ENST00000545686 TRBV2A0A0J9YWF9 115 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 ANKRD20A5PA0PJZ0 165 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 IFITM5A6NNB3 132 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 MID1O15344 667 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 GMDSO60547 372 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 OR2A4O95047 310 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 ACSM4P0C7M7 580 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 SLC35G6P0C7Q6 338 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 CALCBP10092 127 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 NAGAP17050 411 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 DPP4P27487 766 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 DRD3P35462 400 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 ERVFC1P60507 584 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 AGBL4Q5VU57 503 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 Q6ZTK2 550 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 PRSS45Q7RTY3 260 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 KCTD20Q7Z5Y7 419 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 SLC35F2Q8IXU6 374 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 RFLNBQ8N5W9 214 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 CYB561A3Q8NBI2 242 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 OR14A16Q8NHC5 309 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 FCAMRQ8WWV6 532 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 ING5Q8WYH8 240 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 NSMAFQ92636 917 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 COL26A1Q96A83 441 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 SLC25A38Q96DW6 304 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 OR2A7Q96R45 310 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 MCCC2Q9HCC0 563 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 CD93Q9NPY3 652 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 MBNL1Q9NR56 388 aaKnown RBP8.06□□□□□ -1.12
TDP1-204ENST00000545686 CREBZFQ9NS37 354 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 SPHK1Q9NYA1 384 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 OR6C2Q9NZP2 312 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 PIPOXQ9P0Z9 390 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 MGAT4CQ9UBM8 478 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 CHRNA9Q9UGM1 479 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 ING1Q9UK53 422 aaPredicted RBP8.06□□□□□ -1.12
TDP1-204ENST00000545686 PPIEQ9UNP9 301 aaKnown RBP8.06□□□□□ -1.12
TDP1-204ENST00000545686 KCNK6Q9Y257 313 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 CA5BQ9Y2D0 317 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 AK6Q9Y3D8 172 aaKnown RBP8.06□□□□□ -1.12
TDP1-204ENST00000545686 OR1A2Q9Y585 309 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 GXYLT2A0PJZ3 443 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 OR2M5A3KFT3 312 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 MFSD2BA6NFX1 497 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 BRINP1O60477 761 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 CREBL2O60519 120 aaPredicted RBP8.06□□□□□ -1.12
TDP1-204ENST00000545686 B3GALNT1O75752 331 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 PCDH8O95206 1070 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 GUSBP08236 651 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 HOXD4P09016 255 aaPredicted RBP8.06□□□□□ -1.12
TDP1-204ENST00000545686 POU2F2P09086 479 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 SMIM10L1P0DMW3 83 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 SRMP19623 302 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 ZNF10P21506 573 aaPredicted RBP8.06□□□□□ -1.12
TDP1-204ENST00000545686 SLC35D3Q5M8T2 416 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 C1orf53Q5VUE5 145 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 B3GNTL1Q67FW5 361 aaPredicted RBP8.06□□□□□ -1.12
TDP1-204ENST00000545686 ZNF626Q68DY1 528 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 FCRLBQ6BAA4 426 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 OVCH2Q7RTZ1 564 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 GRASPQ7Z6J2 395 aaPredicted RBP8.06□□□□□ -1.12
TDP1-204ENST00000545686 GRAMD2AQ8IUY3 354 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 KCT2Q8NC54 265 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 OR51A7Q8NH64 312 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 OR52I2Q8NH67 350 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 SNX33Q8WV41 574 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 SMIM10Q96HG1 83 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 SFXN2Q96NB2 322 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 ORAI3Q9BRQ5 295 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 REG4Q9BYZ8 158 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 TRIM2Q9C040 744 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 NKIRAS2Q9NYR9 191 aa8.06□□□□□ -1.12
TDP1-204ENST00000545686 GLS2Q9UI32 602 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms