RNA–Protein interactions for RNA: ENST00000544474.5

PDZD4-209, Transcript of PDZ domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene PDZD4, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-209ENST00000544474 SCN3AQ9NY46 2000 aa11.9□□□□□ -0.5
PDZD4-209ENST00000544474 UBE2QL1A1L167 161 aa11.9□□□□□ -0.5
PDZD4-209ENST00000544474 RHPN2P1A8MT19 583 aa11.9□□□□□ -0.5
PDZD4-209ENST00000544474 TERTO14746 1132 aaKnown RBP11.9□□□□□ -0.5
PDZD4-209ENST00000544474 MAPK9P45984 424 aa11.9□□□□□ -0.5
PDZD4-209ENST00000544474 SQSTM1Q13501 440 aa11.9□□□□□ -0.5
PDZD4-209ENST00000544474 CDKN3Q16667 212 aa11.9□□□□□ -0.5
PDZD4-209ENST00000544474 ACER2Q5QJU3 275 aa11.9□□□□□ -0.5
PDZD4-209ENST00000544474 FRRS1Q6ZNA5 592 aa11.9□□□□□ -0.5
PDZD4-209ENST00000544474 NAXDQ8IW45 347 aa11.9□□□□□ -0.5
PDZD4-209ENST00000544474 POGLUT1Q8NBL1 392 aa11.9□□□□□ -0.5
PDZD4-209ENST00000544474 FAM98AQ8NCA5 519 aaKnown RBP11.9□□□□□ -0.5
PDZD4-209ENST00000544474 DUSP19Q8WTR2 217 aa11.9□□□□□ -0.5
PDZD4-209ENST00000544474 CASTOR1Q8WTX7 329 aa11.9□□□□□ -0.5
PDZD4-209ENST00000544474 ZCCHC2Q9C0B9 1178 aaKnown RBP11.9□□□□□ -0.5
PDZD4-209ENST00000544474 TAAR2Q9P1P5 351 aa11.9□□□□□ -0.5
PDZD4-209ENST00000544474 OR51B4Q9Y5P0 310 aa11.9□□□□□ -0.5
PDZD4-209ENST00000544474 A0A1B0GWJ7 208 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 IDSB3KWA1 339 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 NEDD8-MDP1E9PL57 170 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 RNF13O43567 381 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 CLN5O75503 358 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 ZNF821O75541 412 aaPredicted RBP11.89□□□□□ -0.51
PDZD4-209ENST00000544474 RGS9O75916 674 aaPredicted RBP11.89□□□□□ -0.51
PDZD4-209ENST00000544474 MAS1P04201 325 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 C1SP09871 688 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 DRD2P14416 443 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 SPI1P17947 270 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 NTSP30990 170 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 POU3F4P49335 361 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 PON3Q15166 354 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 EIF2S3LQ2VIR3 472 aaKnown RBP11.89□□□□□ -0.51
PDZD4-209ENST00000544474 FAM109BQ6ICB4 259 aaPredicted RBP11.89□□□□□ -0.51
PDZD4-209ENST00000544474 NAA40Q86UY6 237 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 C10orf53Q8N6V4 93 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 OR5M3Q8NGP4 307 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 OVCA2Q8WZ82 227 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 TMEM169Q96HH4 297 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 LURAP1Q96LR2 239 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 SPSB2Q99619 263 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 SSX3Q99909 188 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 RNF208Q9H0X6 261 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 SERTM1A2A2V5 107 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 PRAMEF2O60811 474 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 EFCAB14O75071 495 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 HMGA1P17096 107 aaKnown RBP11.89□□□□□ -0.51
PDZD4-209ENST00000544474 CALCRP30988 508 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 POLR2LP62875 67 aaKnown RBP11.89□□□□□ -0.51
PDZD4-209ENST00000544474 RNF4P78317 190 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 HSD11B1LQ7Z5J1 315 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 SLITRK4Q8IW52 837 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 TEX19Q8NA77 164 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 PIGXQ8TBF5 258 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 ZC3H10Q96K80 434 aaKnown RBP11.89□□□□□ -0.51
PDZD4-209ENST00000544474 ARHGAP9Q9BRR9 750 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 PARP12Q9H0J9 701 aaKnown RBP11.89□□□□□ -0.51
PDZD4-209ENST00000544474 CERS4Q9HA82 394 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 HCFC1R1Q9NWW0 138 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 NPTNQ9Y639 398 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 VPS13AQ96RL7 3174 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 HMGN2P05204 90 aaKnown RBP11.89□□□□□ -0.51
PDZD4-209ENST00000544474 NUBP1P53384 320 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 PDZK1IP1Q13113 114 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 POMZP3Q6PJE2 187 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 CAMKMTQ7Z624 323 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 LRRC28Q86X40 367 aaPredicted RBP11.89□□□□□ -0.51
PDZD4-209ENST00000544474 DMRTC2Q8IXT2 367 aaPredicted RBP11.89□□□□□ -0.51
PDZD4-209ENST00000544474 PCSK9Q8NBP7 692 aaKnown RBP11.89□□□□□ -0.51
PDZD4-209ENST00000544474 OR56B4Q8NH76 319 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 AKR7LQ8NHP1 331 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 RXFP4Q8TDU9 374 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 MCHR1Q99705 422 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 ZFP57Q9NU63 452 aa11.89□□□□□ -0.51
PDZD4-209ENST00000544474 SPTBN5Q9NRC6 3674 aaKnown RBP11.88□□□□□ -0.51
PDZD4-209ENST00000544474 AGAP14A8MT82 685 aa11.88□□□□□ -0.51
PDZD4-209ENST00000544474 SUSD5O60279 629 aa11.88□□□□□ -0.51
PDZD4-209ENST00000544474 FCMRO60667 390 aa11.88□□□□□ -0.51
PDZD4-209ENST00000544474 POP4O95707 220 aaKnown RBP11.88□□□□□ -0.51
PDZD4-209ENST00000544474 UQCRC2P22695 453 aa11.88□□□□□ -0.51
PDZD4-209ENST00000544474 CCR8P51685 355 aa11.88□□□□□ -0.51
PDZD4-209ENST00000544474 HSD17B7P56937 341 aa11.88□□□□□ -0.51
PDZD4-209ENST00000544474 SMPDL3BQ92485 455 aa11.88□□□□□ -0.51
PDZD4-209ENST00000544474 RFKQ969G6 155 aa11.88□□□□□ -0.51
PDZD4-209ENST00000544474 ALG14Q96F25 216 aa11.88□□□□□ -0.51
PDZD4-209ENST00000544474 TMEM41AQ96HV5 264 aa11.88□□□□□ -0.51
PDZD4-209ENST00000544474 RSPO3Q9BXY4 272 aaPredicted RBP11.88□□□□□ -0.51
PDZD4-209ENST00000544474 CPEB1Q9BZB8 566 aaKnown RBP11.88□□□□□ -0.51
PDZD4-209ENST00000544474 ENKD1Q9H0I2 346 aa11.88□□□□□ -0.51
PDZD4-209ENST00000544474 YIPF1Q9Y548 306 aa11.88□□□□□ -0.51
PDZD4-209ENST00000544474 NRG2O14511 850 aaPredicted RBP11.88□□□□□ -0.51
PDZD4-209ENST00000544474 CCL16O15467 120 aa11.88□□□□□ -0.51
PDZD4-209ENST00000544474 AKR7A3O95154 331 aa11.88□□□□□ -0.51
PDZD4-209ENST00000544474 UGT2B7P16662 529 aa11.88□□□□□ -0.51
PDZD4-209ENST00000544474 ATF1P18846 271 aa11.88□□□□□ -0.51
PDZD4-209ENST00000544474 EDNRAP25101 427 aa11.88□□□□□ -0.51
PDZD4-209ENST00000544474 RPL4P36578 427 aaKnown RBP11.88□□□□□ -0.51
PDZD4-209ENST00000544474 LUMP51884 338 aaPredicted RBP11.88□□□□□ -0.51
PDZD4-209ENST00000544474 C21orf58P58505 322 aa11.88□□□□□ -0.51
PDZD4-209ENST00000544474 RAB40BQ12829 278 aa11.88□□□□□ -0.51
PDZD4-209ENST00000544474 ARSIQ5FYB1 569 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms