RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 OR51A7Q8NH64 312 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 LIPHQ8WWY8 451 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 KTI12Q96EK9 354 aaPredicted RBP27.59■■■□□ 2.01
CCM2-219ENST00000544363 MRGPRX4Q96LA9 322 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 NPAS1Q99742 590 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 POLHQ9Y253 713 aa27.59■■■□□ 2.01
CCM2-219ENST00000544363 TRAV27A0A087WT01 109 aa27.58■■■□□ 2.01
CCM2-219ENST00000544363 TRIM64A6NGJ6 449 aa27.58■■■□□ 2.01
CCM2-219ENST00000544363 LRRN3E7EW58 273 aa27.58■■■□□ 2.01
CCM2-219ENST00000544363 M0R129 80 aa27.58■■■□□ 2.01
CCM2-219ENST00000544363 BMP7P18075 431 aa27.58■■■□□ 2.01
CCM2-219ENST00000544363 CXCR4P61073 352 aa27.58■■■□□ 2.01
CCM2-219ENST00000544363 FOXF1Q12946 379 aa27.58■■■□□ 2.01
CCM2-219ENST00000544363 FHL1Q13642 323 aa27.58■■■□□ 2.01
CCM2-219ENST00000544363 BLMHQ13867 455 aa27.58■■■□□ 2.01
CCM2-219ENST00000544363 OR52L1Q8NGH7 329 aa27.58■■■□□ 2.01
CCM2-219ENST00000544363 TRUB1Q8WWH5 349 aaKnown RBP27.58■■■□□ 2.01
CCM2-219ENST00000544363 ZNF566Q969W8 418 aa27.58■■■□□ 2.01
CCM2-219ENST00000544363 TNFRSF13CQ96RJ3 184 aa27.58■■■□□ 2.01
CCM2-219ENST00000544363 TIMMDC1Q9NPL8 285 aa27.58■■■□□ 2.01
CCM2-219ENST00000544363 TVP23BQ9NYZ1 205 aa27.58■■■□□ 2.01
CCM2-219ENST00000544363 IL20RAQ9UHF4 553 aa27.58■■■□□ 2.01
CCM2-219ENST00000544363 ZNF337Q9Y3M9 751 aa27.58■■■□□ 2.01
CCM2-219ENST00000544363 A8MVM7 634 aa27.57■■■□□ 2
CCM2-219ENST00000544363 CDK2AP1O14519 115 aa27.57■■■□□ 2
CCM2-219ENST00000544363 TRIM3O75382 744 aaPredicted RBP27.57■■■□□ 2
CCM2-219ENST00000544363 F10P00742 488 aa27.57■■■□□ 2
CCM2-219ENST00000544363 CRHBPP24387 322 aa27.57■■■□□ 2
CCM2-219ENST00000544363 FMO3P31513 532 aa27.57■■■□□ 2
CCM2-219ENST00000544363 TEKQ02763 1124 aa27.57■■■□□ 2
CCM2-219ENST00000544363 CDC20Q12834 499 aa27.57■■■□□ 2
CCM2-219ENST00000544363 TIGD3Q6B0B8 471 aa27.57■■■□□ 2
CCM2-219ENST00000544363 LINC00696Q6ZRV3 163 aa27.57■■■□□ 2
CCM2-219ENST00000544363 CCDC103Q8IW40 242 aa27.57■■■□□ 2
CCM2-219ENST00000544363 LRRC17Q8N6Y2 441 aa27.57■■■□□ 2
CCM2-219ENST00000544363 OR2T33Q8NG76 320 aa27.57■■■□□ 2
CCM2-219ENST00000544363 OR4Q3Q8NH05 313 aa27.57■■■□□ 2
CCM2-219ENST00000544363 STK35Q8TDR2 534 aa27.57■■■□□ 2
CCM2-219ENST00000544363 TRAV36DV7A0A075B6V5 113 aa27.56■■■□□ 2
CCM2-219ENST00000544363 A6NL46 340 aa27.56■■■□□ 2
CCM2-219ENST00000544363 SLC1A7O00341 560 aa27.56■■■□□ 2
CCM2-219ENST00000544363 NPIPB7O75200 414 aa27.56■■■□□ 2
CCM2-219ENST00000544363 WDPCPO95876 746 aa27.56■■■□□ 2
CCM2-219ENST00000544363 CCDC159P0C7I6 412 aa27.56■■■□□ 2
CCM2-219ENST00000544363 SMIM18P0DKX4 95 aa27.56■■■□□ 2
CCM2-219ENST00000544363 AGAP7PQ5VUJ5 663 aa27.56■■■□□ 2
CCM2-219ENST00000544363 C5orf46Q6UWT4 87 aa27.56■■■□□ 2
CCM2-219ENST00000544363 C10orf53Q8N6V4 93 aa27.56■■■□□ 2
CCM2-219ENST00000544363 BPIFB6Q8NFQ5 453 aa27.56■■■□□ 2
CCM2-219ENST00000544363 POC1BQ8TC44 478 aa27.56■■■□□ 2
CCM2-219ENST00000544363 KCNE4Q8WWG9 221 aa27.56■■■□□ 2
CCM2-219ENST00000544363 TAAR8Q969N4 342 aa27.56■■■□□ 2
CCM2-219ENST00000544363 AGAP4Q96P64 663 aa27.56■■■□□ 2
CCM2-219ENST00000544363 TEX12Q9BXU0 123 aa27.56■■■□□ 2
CCM2-219ENST00000544363 ENKD1Q9H0I2 346 aa27.56■■■□□ 2
CCM2-219ENST00000544363 UBQLN3Q9H347 655 aa27.56■■■□□ 2
CCM2-219ENST00000544363 MCCC2Q9HCC0 563 aa27.56■■■□□ 2
CCM2-219ENST00000544363 GPR83Q9NYM4 423 aa27.56■■■□□ 2
CCM2-219ENST00000544363 CHRNA9Q9UGM1 479 aa27.56■■■□□ 2
CCM2-219ENST00000544363 MPDZO75970 2070 aa27.56■■■□□ 2
CCM2-219ENST00000544363 A0A087WZY1 265 aa27.56■■■□□ 2
CCM2-219ENST00000544363 ZC3H12DA2A288 527 aaKnown RBP27.56■■■□□ 2
CCM2-219ENST00000544363 NEURL1O76050 574 aa27.56■■■□□ 2
CCM2-219ENST00000544363 DNASE1L1P49184 302 aa27.56■■■□□ 2
CCM2-219ENST00000544363 SNRPGP62308 76 aaKnown RBP27.56■■■□□ 2
CCM2-219ENST00000544363 PGGHGQ32M88 737 aa27.56■■■□□ 2
CCM2-219ENST00000544363 SPINK14Q6IE38 97 aa27.56■■■□□ 2
CCM2-219ENST00000544363 THSD4Q6ZMP0 1018 aa27.56■■■□□ 2
CCM2-219ENST00000544363 SLC43A2Q8N370 569 aa27.56■■■□□ 2
CCM2-219ENST00000544363 TSPAN14Q8NG11 270 aa27.56■■■□□ 2
CCM2-219ENST00000544363 OR8J1Q8NGP2 316 aa27.56■■■□□ 2
CCM2-219ENST00000544363 JSRP1Q96MG2 331 aaPredicted RBP27.56■■■□□ 2
CCM2-219ENST00000544363 GNRHR2Q96P88 292 aa27.56■■■□□ 2
CCM2-219ENST00000544363 POLDIP3Q9BY77 421 aaKnown RBP27.56■■■□□ 2
CCM2-219ENST00000544363 PRRG3Q9BZD7 231 aa27.56■■■□□ 2
CCM2-219ENST00000544363 NANSQ9NR45 359 aa27.56■■■□□ 2
CCM2-219ENST00000544363 BLOC1S6Q9UL45 172 aa27.56■■■□□ 2
CCM2-219ENST00000544363 RPS5P46782 204 aaKnown RBP27.55■■■□□ 2
CCM2-219ENST00000544363 PCYT1AP49585 367 aa27.55■■■□□ 2
CCM2-219ENST00000544363 LTBQ06643 244 aa27.55■■■□□ 2
CCM2-219ENST00000544363 MOGAT1Q96PD6 335 aa27.55■■■□□ 2
CCM2-219ENST00000544363 IL4I1Q96RQ9 567 aa27.55■■■□□ 2
CCM2-219ENST00000544363 A0A0G2JMM0 328 aa27.54■■■□□ 2
CCM2-219ENST00000544363 A0A1W2PPB8 328 aa27.54■■■□□ 2
CCM2-219ENST00000544363 A0A1W2PRS3 328 aa27.54■■■□□ 2
CCM2-219ENST00000544363 KIR3DP1A8MWS1 328 aa27.54■■■□□ 2
CCM2-219ENST00000544363 CNR1P21554 472 aa27.54■■■□□ 2
CCM2-219ENST00000544363 MAP2K6P52564 334 aa27.54■■■□□ 2
CCM2-219ENST00000544363 DSCR4P56555 118 aaPredicted RBP27.54■■■□□ 2
CCM2-219ENST00000544363 SNAPC1Q16533 368 aa27.54■■■□□ 2
CCM2-219ENST00000544363 SMN1Q16637 294 aaKnown RBP27.54■■■□□ 2
CCM2-219ENST00000544363 C1QL3Q5VWW1 255 aa27.54■■■□□ 2
CCM2-219ENST00000544363 TCEANCQ8N8B7 351 aa27.54■■■□□ 2
CCM2-219ENST00000544363 ZNF248Q8NDW4 579 aa27.54■■■□□ 2
CCM2-219ENST00000544363 ZBTB8AQ96BR9 441 aa27.54■■■□□ 2
CCM2-219ENST00000544363 SIGLEC12Q96PQ1 595 aa27.54■■■□□ 2
CCM2-219ENST00000544363 SLC38A2Q96QD8 506 aa27.54■■■□□ 2
CCM2-219ENST00000544363 PLA2G3Q9NZ20 509 aa27.54■■■□□ 2
CCM2-219ENST00000544363 SHISA8B8ZZ34 492 aa27.53■■■□□ 2
CCM2-219ENST00000544363 BHLHE40O14503 412 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms