RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 TATDN3Q17R31 274 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 CEP55Q53EZ4 464 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 MFSD14CQ5VZR4 134 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 FAAP20Q6NZ36 180 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 ACOT1Q86TX2 421 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 HIPK1Q86Z02 1210 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 TMEM123Q8N131 208 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 ZCCHC7Q8N3Z6 543 aaKnown RBP2.91□□□□□ -1.94
SCFD1-207ENST00000544052 ANKFN1Q8N957 763 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 BEST4Q8NFU0 473 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 ADAMTS16Q8TE57 1224 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 FAM3CQ92520 227 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 CNDP1Q96KN2 507 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 C9orf85Q96MD7 179 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 RBM4BQ9BQ04 359 aaKnown RBP2.91□□□□□ -1.94
SCFD1-207ENST00000544052 TM2D1Q9BX74 207 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 ZBP1Q9H171 429 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 NYAP2Q9P242 653 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 KLK13Q9UKR3 277 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 ASB3Q9Y575 518 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 MAB21L2Q9Y586 359 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 TRANK1O15050 2925 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 COL4A6Q14031 1691 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 A0A0D9SFI3 127 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 METTL21EPA6NDL7 271 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 SAGE2PA6NJ88 616 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 SRRM5B3KS81 715 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 RNF113AO15541 343 aaKnown RBP2.91□□□□□ -1.94
SCFD1-207ENST00000544052 LCMT2O60294 686 aaKnown RBP2.91□□□□□ -1.94
SCFD1-207ENST00000544052 ADCY5O95622 1261 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 H2AFXP16104 143 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-207ENST00000544052 TPSB2P20231 275 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 HPCAL1P37235 193 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 TAGLN2P37802 199 aaKnown RBP2.91□□□□□ -1.94
SCFD1-207ENST00000544052 EMDP50402 254 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 IST1P53990 364 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 CCNA1P78396 465 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 COX10Q12887 443 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 DPYSL3Q14195 570 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 FCN2Q15485 313 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 TPSAB1Q15661 275 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 MICAQ29983 383 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 FAM182AQ5T1J6 154 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 LRRC70Q7Z2Q7 622 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 ZNF589Q86UQ0 364 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-207ENST00000544052 ZNF679Q8IYX0 411 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 ZSCAN4Q8NAM6 433 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-207ENST00000544052 RLN3Q8WXF3 142 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 MYLPFQ96A32 169 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 PSKH2Q96QS6 385 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 RANBP9Q96S59 729 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 SLC30A2Q9BRI3 323 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 FEM1AQ9BSK4 669 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 SLC38A10Q9HBR0 1119 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 HOXC10Q9NYD6 342 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 PAK5Q9P286 719 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 EXTL2Q9UBQ6 330 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 TBX21Q9UL17 535 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 WDR45Q9Y484 360 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 GMPPBQ9Y5P6 360 aa2.91□□□□□ -1.94
SCFD1-207ENST00000544052 NCOR1O75376 2440 aa2.9□□□□□ -1.94
SCFD1-207ENST00000544052 SYNJ2BP-COX16A0A087WUM0 186 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 ZNF840PA6NDX5 716 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 E9PAM4 449 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 ARPC3O15145 178 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 SRPX2O60687 465 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-207ENST00000544052 RAMP1O60894 148 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 SNX4O95219 450 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 HBQ1P09105 142 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 BCKDHAP12694 445 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 TBXA2RP21731 343 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 CDH5P33151 784 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-207ENST00000544052 GNPDA1P46926 289 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 DHPSP49366 369 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-207ENST00000544052 ERVPABLB-1P60509 514 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 BEX3Q00994 111 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 PUDPQ08623 228 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 ZNF154Q13106 437 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 SLC5A12Q1EHB4 618 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 SLC22A6Q4U2R8 563 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 SYT10Q6XYQ8 523 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 VSTM4Q8IW00 320 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 NAXDQ8IW45 347 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 ZNF683Q8IZ20 524 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 EIF1ADQ8N9N8 165 aaKnown RBP2.9□□□□□ -1.95
SCFD1-207ENST00000544052 ARNTL2Q8WYA1 636 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 SH3YL1Q96HL8 342 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-207ENST00000544052 AMDHD1Q96NU7 426 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 CDX2Q99626 313 aaPredicted RBP2.9□□□□□ -1.95
SCFD1-207ENST00000544052 CYTH4Q9UIA0 394 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 CRLS1Q9UJA2 301 aa2.9□□□□□ -1.95
SCFD1-207ENST00000544052 MYO7AQ13402 2215 aa2.89□□□□□ -1.95
SCFD1-207ENST00000544052 OR6C65A6NJZ3 312 aa2.89□□□□□ -1.95
SCFD1-207ENST00000544052 EFCAB7A8K855 629 aa2.89□□□□□ -1.95
SCFD1-207ENST00000544052 G3V3Y1 287 aa2.89□□□□□ -1.95
SCFD1-207ENST00000544052 H3BMQ9 156 aa2.89□□□□□ -1.95
SCFD1-207ENST00000544052 BTN3A3O00478 584 aa2.89□□□□□ -1.95
SCFD1-207ENST00000544052 FCN1O00602 326 aa2.89□□□□□ -1.95
SCFD1-207ENST00000544052 PRRG1O14668 218 aa2.89□□□□□ -1.95
SCFD1-207ENST00000544052 GPRIN2O60269 458 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms