RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 C3orf38Q5JPI3 329 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 TPTE2P1Q5T6R2 138 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 FAAP20Q6NZ36 180 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 MON1BQ7L1V2 547 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 BHLHA15Q7RTS1 189 aaPredicted RBP8.25□□□□□ -1.09
VPS13D-212ENST00000543766 GRINAQ7Z429 371 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 ZFP41Q8N8Y5 198 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 ITFG1Q8TB96 612 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 GLMPQ8WWB7 406 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 AKR1E2Q96JD6 320 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 GPR78Q96P69 363 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 PRDM13Q9H4Q3 707 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 NANSQ9NR45 359 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 EPHA6Q9UF33 1036 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 ZDHHC8Q9ULC8 765 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 hCG_1818297A0A087WSY0 165 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 SLC35F4A4IF30 521 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 ARL5CA6NH57 179 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 TLR4O00206 839 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 BHLHE40O14503 412 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 PF4P02776 101 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 UCHL1P09936 223 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 UGT2B7P16662 529 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 C4BPBP20851 252 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 GTF2BQ00403 316 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 PPP3CAQ08209 521 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 PMPCAQ10713 525 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 TNK1Q13470 666 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 TRIP4Q15650 581 aaPredicted RBP8.25□□□□□ -1.09
VPS13D-212ENST00000543766 RPE65Q16518 533 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 ZNF562Q6V9R5 426 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 BAP18Q8IXM2 172 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 TMEM192Q8IY95 271 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 MFSD9Q8NBP5 474 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 OR2G2Q8NGZ5 317 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 NUBPLQ8TB37 319 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 CRYGNQ8WXF5 182 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 VWCEQ96DN2 955 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 MSTO1Q9BUK6 570 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 PITPNC1Q9UKF7 332 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 SAMD4AQ9UPU9 718 aaKnown RBP8.25□□□□□ -1.09
VPS13D-212ENST00000543766 A0A1B0GUH1 482 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 SYT5O00445 386 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 TPST1O60507 370 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 GPR32O75388 356 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 PIGRP01833 764 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 ADRA2CP18825 462 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 CA5AP35218 305 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 RPL22P35268 128 aaKnown RBP8.25□□□□□ -1.09
VPS13D-212ENST00000543766 RGS4P49798 205 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 RPS15P62841 145 aaKnown RBP8.25□□□□□ -1.09
VPS13D-212ENST00000543766 SPIBQ01892 262 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 IKZF1Q13422 519 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 VAMP3Q15836 100 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 HAGHQ16775 308 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 DCAF10Q5QP82 559 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 RNASEKQ6P5S7 137 aaKnown RBP8.25□□□□□ -1.09
VPS13D-212ENST00000543766 OTOP2Q7RTS6 562 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 PRSS48Q7RTY5 328 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 YRDCQ86U90 279 aaKnown RBP8.25□□□□□ -1.09
VPS13D-212ENST00000543766 SCAMP5Q8TAC9 235 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 TMEM186Q96B77 213 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 ERMAPQ96PL5 475 aaPredicted RBP8.25□□□□□ -1.09
VPS13D-212ENST00000543766 NIPSNAP1Q9BPW8 284 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 WRAP53Q9BUR4 548 aaKnown RBP8.25□□□□□ -1.09
VPS13D-212ENST00000543766 GLIS2Q9BZE0 524 aaPredicted RBP8.25□□□□□ -1.09
VPS13D-212ENST00000543766 WWTR1Q9GZV5 400 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 SIK2Q9H0K1 926 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 DCSTAMPQ9H295 470 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 TUBD1Q9UJT1 453 aa8.25□□□□□ -1.09
VPS13D-212ENST00000543766 MPTX1A8MV57 137 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 B3GALT2O43825 422 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 C1QCP02747 245 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 PPBPP02775 128 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 LPLP06858 475 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 HOXB5P09067 269 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 ANXA4P09525 319 aaPredicted RBP8.24□□□□□ -1.09
VPS13D-212ENST00000543766 BMP7P18075 431 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 RPS12P25398 132 aaKnown RBP8.24□□□□□ -1.09
VPS13D-212ENST00000543766 GRPRP30550 384 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 ABHD15Q6UXT9 468 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 LINGO4Q6UY18 593 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 PDZD9Q8IXQ8 264 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 CMTM7Q96FZ5 175 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 OR6C1Q96RD1 312 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 FAAP24Q9BTP7 215 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 ZNF426Q9BUY5 554 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 RXFP3Q9NSD7 469 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 METTL1Q9UBP6 276 aaKnown RBP8.24□□□□□ -1.09
VPS13D-212ENST00000543766 ACSL6Q9UKU0 697 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 TNFSF18Q9UNG2 199 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 RFXAPO00287 272 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 MAGEB4O15481 346 aaPredicted RBP8.24□□□□□ -1.09
VPS13D-212ENST00000543766 B4GALT5O43286 388 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 B4GALT3O60512 393 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 SRPX2O60687 465 aaPredicted RBP8.24□□□□□ -1.09
VPS13D-212ENST00000543766 ATP6AP2O75787 350 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 SC5DO75845 299 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 GABARAPO95166 117 aa8.24□□□□□ -1.09
VPS13D-212ENST00000543766 CERS1P27544 350 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms