RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 LGALS14Q8TCE9 139 aa12.65□□□□□ -0.38
VPS33A-208ENST00000543633 TRIM2Q9C040 744 aa12.65□□□□□ -0.38
VPS33A-208ENST00000543633 MCCC2Q9HCC0 563 aa12.65□□□□□ -0.38
VPS33A-208ENST00000543633 CHRNA9Q9UGM1 479 aa12.65□□□□□ -0.38
VPS33A-208ENST00000543633 KIF25Q9UIL4 384 aa12.65□□□□□ -0.38
VPS33A-208ENST00000543633 KCNE5Q9UJ90 142 aa12.65□□□□□ -0.38
VPS33A-208ENST00000543633 MYO7AQ13402 2215 aa12.65□□□□□ -0.39
VPS33A-208ENST00000543633 GXYLT2A0PJZ3 443 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 G3V3Q6 166 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 I3L521 148 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 AIPO00170 330 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 LATO43561 262 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 MPC2O95563 127 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 PSMB1P20618 241 aaKnown RBP12.64□□□□□ -0.39
VPS33A-208ENST00000543633 MECP2P51608 486 aaKnown RBP12.64□□□□□ -0.39
VPS33A-208ENST00000543633 SRP54P61011 504 aaKnown RBP12.64□□□□□ -0.39
VPS33A-208ENST00000543633 RUNX2Q13950 521 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 FGFBP1Q14512 234 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 KIR2DS3Q14952 304 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 AANATQ16613 207 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 ISXQ2M1V0 245 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 ABHD13Q7L211 337 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 SLC35F2Q8IXU6 374 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 OR4D9Q8NGE8 314 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 OR14A16Q8NHC5 309 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 LCN9Q8WX39 176 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 RSC1A1Q92681 617 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 ASB16Q96NS5 453 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 DPCDQ9BVM2 203 aaPredicted RBP12.64□□□□□ -0.39
VPS33A-208ENST00000543633 TMPRSS13Q9BYE2 586 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 NPDC1Q9NQX5 325 aaPredicted RBP12.64□□□□□ -0.39
VPS33A-208ENST00000543633 KLHL9Q9P2J3 617 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 SPACA6W5XKT8 324 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 CEP290O15078 2479 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 RFXAPO00287 272 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 NDUFB2O95178 105 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 TFP02787 698 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 IFNA16P05015 189 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 GIPP09681 153 aaPredicted RBP12.64□□□□□ -0.39
VPS33A-208ENST00000543633 RAB40ALP0C0E4 278 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 ANKRD34CP0C6C1 535 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 CLUP10909 449 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 PTNP21246 168 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 MAT2AP31153 395 aaKnown RBP12.64□□□□□ -0.39
VPS33A-208ENST00000543633 SGCGQ13326 291 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 FHL1Q13642 323 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 TP53I3Q53FA7 332 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 FAM78AQ5JUQ0 283 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 NLRC3Q7RTR2 1065 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 SLC38A6Q8IZM9 456 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 CMTM4Q8IZR5 234 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 LSMEM1Q8N8F7 131 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 CAMKVQ8NCB2 501 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 OR11G2Q8NGC1 345 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 OR13C5Q8NGS8 318 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 OR2T35Q8NGX2 323 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 RAB40AQ8WXH6 277 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 SMARCD2Q92925 531 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 DACT3Q96B18 629 aaPredicted RBP12.64□□□□□ -0.39
VPS33A-208ENST00000543633 RBP7Q96R05 134 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 HRASLSQ9HDD0 168 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 ADAP2Q9NPF8 381 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 MED9Q9NWA0 146 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 POMT2Q9UKY4 750 aa12.64□□□□□ -0.39
VPS33A-208ENST00000543633 YBX2Q9Y2T7 364 aaKnown RBP12.64□□□□□ -0.39
VPS33A-208ENST00000543633 REV3LO60673 3130 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 A0A1B0GWA3 101 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 M0R233 179 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 PEX12O00623 359 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 BET1O15155 118 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 KRT33AO76009 404 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 OR7A10O76100 309 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 NKX2-2O95096 273 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 LDOC1O95751 146 aaPredicted RBP12.63□□□□□ -0.39
VPS33A-208ENST00000543633 IL5P05113 134 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 CALCBP10092 127 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 IGFALSP35858 605 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 SIM1P81133 766 aaPredicted RBP12.63□□□□□ -0.39
VPS33A-208ENST00000543633 TAGLNQ01995 201 aaKnown RBP12.63□□□□□ -0.39
VPS33A-208ENST00000543633 PLAURQ03405 335 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 IL10RAQ13651 578 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 TRMT12Q53H54 448 aaKnown RBP12.63□□□□□ -0.39
VPS33A-208ENST00000543633 FAM199XQ6PEV8 388 aaPredicted RBP12.63□□□□□ -0.39
VPS33A-208ENST00000543633 CYB561A3Q8NBI2 242 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 OR51A7Q8NH64 312 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 NSMAFQ92636 917 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 OMA1Q96E52 524 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 OR2M4Q96R27 311 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 OR2A5Q96R48 311 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 GSX2Q9BZM3 304 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 AUNIPQ9H7T9 357 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 MRPS7Q9Y2R9 242 aaKnown RBP12.63□□□□□ -0.39
VPS33A-208ENST00000543633 PLEKHM1Q9Y4G2 1056 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 ENTPD2Q9Y5L3 495 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 NUP210LQ5VU65 1888 aa12.63□□□□□ -0.39
VPS33A-208ENST00000543633 TRBV2A0A0J9YWF9 115 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 SNRPGP15A8MWD9 76 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 MEN1O00255 615 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 PAK4O96013 591 aaPredicted RBP12.62□□□□□ -0.39
VPS33A-208ENST00000543633 HOXC4P09017 264 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms