RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	ATM	Q13315	3056 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	TRGV8	A0A0C4DH27	118 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545		A0A0J9YW62	118 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	ZC3H12D	A2A288	527 aa	Known RBP	9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545		H0YHG0	523 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	SULT2B1	O00204	365 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	ADAMDEC1	O15204	470 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	SLC19A2	O60779	497 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	ENTPD5	O75356	428 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	E2F6	O75461	281 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	KRT36	O76013	467 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	SYNGR4	O95473	234 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	CPN1	P15169	458 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	ZNF708	P17019	499 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	GTF2E2	P29084	291 aa	Known RBP	9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	IDUA	P35475	653 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	MAGEA2	P43356	314 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	CLDN18	P56856	261 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	MYBPH	Q13203	477 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	SF3B4	Q15427	424 aa	Known RBP eCLIP	9.14	□□□□□ -0.95	3e-9	■■■□□ 15.9
CPSF7-221	ENST00000543545	C1orf140	Q5VVS0	124 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	C1QL3	Q5VWW1	255 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	OR2T5	Q6IEZ7	315 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	ZFP1	Q6P2D0	407 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	TMPPE	Q6ZT21	453 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	ESPNL	Q6ZVH7	1005 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	FGD2	Q7Z6J4	655 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	CD163	Q86VB7	1156 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	OR2T29	Q8NH02	315 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	OR10D3	Q8NH80	312 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	STK35	Q8TDR2	534 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	TMEM255B	Q8WV15	326 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	TMEM239	Q8WW34	195 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	SLCO4A1	Q96BD0	722 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	ARL5B	Q96KC2	179 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	POTEKP	Q9BYX7	375 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	PNPLA3	Q9NST1	481 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	C6orf203	Q9P0P8	240 aa	Predicted RBP	9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	OSGIN2	Q9Y236	505 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	MED31	Q9Y3C7	131 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	HDGFL3	Q9Y3E1	203 aa		9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	SAMHD1	Q9Y3Z3	626 aa	Known RBP	9.14	□□□□□ -0.95
CPSF7-221	ENST00000543545	ZFYVE26	Q68DK2	2539 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	IGKV1D-42	A0A075B6H8	117 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	TRAV36DV7	A0A075B6V5	113 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	TRBV4-1	A0A0J9YWV2	114 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545		A0A1W2PRQ8	180 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	FIGNL2	A6NMB9	653 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	AHRR	A9YTQ3	701 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	CLOCK	O15516	846 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	HNRNPR	O43390	633 aa	Known RBP	9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	OR2T1	O43869	369 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	CXCL13	O43927	109 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	DEAF1	O75398	565 aa	Predicted RBP	9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	C1QL1	O75973	258 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	LYPD3	O95274	346 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	BAG2	O95816	211 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	CH25H	O95992	272 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	LDLR	P01130	860 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	FCGR1A	P12314	374 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	GABRA1	P14867	456 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	CBL	P22681	906 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	FAS	P25445	335 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	RBM34	P42696	430 aa	Known RBP	9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	RPS5	P46782	204 aa	Known RBP	9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	DIO1	P49895	249 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	CSNK2A1	P68400	391 aa	Predicted RBP	9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	PPP1R8	Q12972	351 aa	Known RBP	9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	MRPL49	Q13405	166 aa	Known RBP	9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	DGCR6	Q14129	220 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	OR7A5	Q15622	319 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	IQCC	Q4KMZ1	466 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	PODNL1	Q6PEZ8	512 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	C5orf46	Q6UWT4	87 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	C3P1	Q6ZMU1	363 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	WDR88	Q6ZMY6	472 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	P4HA3	Q7Z4N8	544 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	CDK20	Q8IZL9	346 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	PAPD5	Q8NDF8	572 aa	Known RBP	9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	ACOT11	Q8WXI4	607 aa	Predicted RBP	9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	MIB2	Q96AX9	1013 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	ZHX1-C8orf76	Q96EF9	292 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	KTI12	Q96EK9	354 aa	Predicted RBP	9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	ZNF845	Q96IR2	970 aa	Predicted RBP	9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	ALPK1	Q96QP1	1244 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	TRIB1	Q96RU8	372 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	TUBA1C	Q9BQE3	449 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	PRSS27	Q9BQR3	290 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	TMEM43	Q9BTV4	400 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	KLHL4	Q9C0H6	718 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	PRDM14	Q9GZV8	571 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	ANKRD19P	Q9H560	264 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	S100A14	Q9HCY8	104 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	KRCC1	Q9NPI7	259 aa	Predicted RBP	9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	ARMC1	Q9NVT9	282 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	PAQR5	Q9NXK6	330 aa	Predicted RBP	9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	DNAJB9	Q9UBS3	223 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	MCTS1	Q9ULC4	181 aa	Known RBP	9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545		U3KQV3	271 aa		9.13	□□□□□ -0.95
CPSF7-221	ENST00000543545	ITPR1	Q14643	2758 aa		9.13	□□□□□ -0.95

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