RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 ATG5Q9H1Y0 275 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 CLMPQ9H6B4 373 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 WSB2Q9NYS7 404 aaPredicted RBP6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 VSX1Q9NZR4 365 aaPredicted RBP6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 ABCD2Q9UBJ2 740 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 TESQ9UGI8 421 aaKnown RBP6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 NPPBP16860 134 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 MAOAP21397 527 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 RUNX2Q13950 521 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 PCGF3Q3KNV8 242 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 LINC01559Q495D7 138 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 TMEM64Q6YI46 380 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 SSX6Q7RTT6 188 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 AAED1Q7RTV5 226 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 SLC22A16Q86VW1 577 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 GALNT15Q8N3T1 639 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 SAMD12Q8N8I0 201 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 CPT1CQ8TCG5 803 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 MAFIPQ8WZ33 124 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 USB1Q9BQ65 265 aaKnown RBP6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 SH2B3Q9UQQ2 575 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 GPR45Q9Y5Y3 372 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 SLC5A10A0PJK1 596 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 IDSB3KWA1 339 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 J3QRK9 145 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 PRRG2O14669 202 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 PPP1R2P9O14990 202 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 CR2P20023 1033 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 EIF1P41567 113 aaKnown RBP6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 ERVK-25P63136 954 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 ELAVL1Q15717 326 aaKnown RBP6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 ZFP69Q49AA0 526 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 CCSMST1Q4G0I0 132 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 C6orf141Q5SZD1 244 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 MRPL2Q5T653 305 aaKnown RBP6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 C5orf46Q6UWT4 87 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF584Q8IVC4 421 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 CPOQ8IVL8 374 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 OR2C3Q8N628 320 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 SENP5Q96HI0 755 aaPredicted RBP6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 BIRC8Q96P09 236 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 FUZQ9BT04 418 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 RPP25Q9BUL9 199 aaKnown RBP6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 CDCP1Q9H5V8 836 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 IL20Q9NYY1 176 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 COLQQ9Y215 455 aaPredicted RBP6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF337Q9Y3M9 751 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 C4orf47A7E2U8 309 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 GPR171O14626 319 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 CLEC2LP0C7M8 214 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 GPX3P22352 226 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 GNRHRP30968 328 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 RPS5P46782 204 aaKnown RBP6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 RPL34P49207 117 aaKnown RBP6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 MAN2A2P49641 1150 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 FXYD6P3P58550 94 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 PSPHP78330 225 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 BNIP3Q12983 259 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 MICAQ29983 383 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 PIP5KL1Q5T9C9 394 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 AGBL4Q5VU57 503 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF704Q6ZNC4 412 aaPredicted RBP6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 MED25Q71SY5 747 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 VRK2Q86Y07 508 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 IQCF1Q8N6M8 205 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 SIRT6Q8N6T7 355 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF615Q8N8J6 731 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 CADM4Q8NFZ8 388 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 OR7G1Q8NGA0 311 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 OR9Q2Q8NGE9 314 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 ZMYND19Q96E35 227 aaPredicted RBP6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 MGLLQ99685 303 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 TREX2Q9BQ50 279 aaPredicted RBP6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 CHIAQ9BZP6 476 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 SLC22A4Q9H015 551 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 OR10A2Q9H208 303 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 KCNIP3Q9Y2W7 256 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 NOP16Q9Y3C1 178 aaKnown RBP6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 SMCHD1A6NHR9 2005 aa6.42□□□□□ -1.38
SRGAP1-206ENST00000543397 CCDC187A0A096LP49 1063 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 SPTY2D1-AS1A0A0U1RR47 76 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 SLC16A7O60669 478 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 RFPL3O75679 317 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 RBMXP38159 391 aaKnown RBP6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 SOX3P41225 446 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 ALDH3B1P43353 468 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 HNRNPA0Q13151 305 aaKnown RBP6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 GK3PQ14409 553 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 FCRLBQ6BAA4 426 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 KCTD9Q7L273 389 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 CLEC14AQ86T13 490 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 CARFQ8N187 725 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 SDR9C7Q8NEX9 313 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 MFSD8Q8NHS3 518 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 CCL4L1Q8NHW4 92 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 FBXO27Q8NI29 283 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 GCDHQ92947 438 aaPredicted RBP6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF775Q96BV0 537 aaPredicted RBP6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 C3orf30Q96M34 536 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms