RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 RAC3P60763 192 aa15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 TRIM25Q14258 630 aaKnown RBP15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 ELOA3BQ3SY89 546 aa15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 SWT1Q5T5J6 900 aaKnown RBP15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 PLXDC2Q6UX71 529 aa15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 TSPYL5Q86VY4 417 aaPredicted RBP15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 C9orf106Q8NAJ2 232 aa15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 ELOA3Q8NG57 546 aa15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 FNDC9Q8TBE3 224 aa15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 ADAMTS16Q8TE57 1224 aa15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 GEMIN6Q8WXD5 167 aaKnown RBP15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 CPNE4Q96A23 557 aaPredicted RBP15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 CLPTM1LQ96KA5 538 aa15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 SRXN1Q9BYN0 137 aa15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 POTEKPQ9BYX7 375 aa15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 POLR2J2Q9GZM3 115 aaKnown RBP15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 POLR2J3Q9H1A7 115 aaKnown RBP15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 MCTS1Q9ULC4 181 aaKnown RBP15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 ARHGAP21Q5T5U3 1957 aa15.34■□□□□ 0.05
RABGGTA-203ENST00000543002 NCOA6Q14686 2063 aaPredicted RBP15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 KIAA1549Q9HCM3 1950 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 PCNX1Q96RV3 2341 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 A0A087WUJ7 227 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 A0A0G2JNJ9 132 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 ZC3H12DA2A288 527 aaKnown RBP15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 TRAPPC13A5PLN9 417 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 SULT2B1O00204 365 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 DNAJC8O75937 253 aaPredicted RBP15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 RCBTB2O95199 551 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 PMS2P2O95744 297 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 IL2RAP01589 272 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 IFNW1P05000 195 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 FCGR2AP12318 317 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 DIO1P49895 249 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 CDH12P55289 794 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 CSNK2A1P68400 391 aaPredicted RBP15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 MYBPHQ13203 477 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 PGM2L1Q6PCE3 622 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 DEF8Q6ZN54 512 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 P4HA3Q7Z4N8 544 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 MRGPRGQ86SM5 289 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 LSRQ86X29 649 aaPredicted RBP15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 STK35Q8TDR2 534 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 ITLN2Q8WWU7 325 aaPredicted RBP15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 ZFP3Q96NJ6 502 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 PRRG4Q9BZD6 226 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 COQ3Q9NZJ6 369 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 Q9UFV3 132 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 RNF6Q9Y252 685 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 TRAPPC4Q9Y296 219 aa15.33■□□□□ 0.04
RABGGTA-203ENST00000543002 HSPB2A8KAH6 182 aa15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 GSC2O15499 205 aa15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 CHP2O43745 196 aa15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 NPIPB7O75200 414 aa15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 AQP8O94778 261 aa15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 PRKD3O94806 890 aa15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 LYPD3O95274 346 aa15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 THY1P04216 161 aa15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 RNF224P0DH78 156 aa15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 AGAP20933 346 aa15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 MS4A2Q01362 244 aa15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 HSPB2Q16082 182 aa15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 ZNF239Q16600 458 aaKnown RBP15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 OR2A2Q6IF42 318 aa15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 XKRXQ6PP77 449 aa15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 LINC00114Q6XXX2 140 aa15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 ZNF808Q8N4W9 903 aaPredicted RBP15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 NAXEQ8NCW5 288 aa15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 RNF217Q8TC41 542 aa15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 ASB5Q8WWX0 329 aa15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 SDCCAG3Q96C92 435 aa15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 ASB9Q96DX5 294 aa15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 PYURFQ96I23 114 aa15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 AMBRA1Q9C0C7 1298 aa15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 RNF122Q9H9V4 155 aa15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.32■□□□□ 0.04
RABGGTA-203ENST00000543002 EBAG9O00559 213 aa15.31■□□□□ 0.04
RABGGTA-203ENST00000543002 DNPH1O43598 174 aa15.31■□□□□ 0.04
RABGGTA-203ENST00000543002 OR5F1O95221 314 aa15.31■□□□□ 0.04
RABGGTA-203ENST00000543002 IMPDH2P12268 514 aa15.31■□□□□ 0.04
RABGGTA-203ENST00000543002 ATP6V1B2P21281 511 aa15.31■□□□□ 0.04
RABGGTA-203ENST00000543002 CHRNB4P30926 498 aa15.31■□□□□ 0.04
RABGGTA-203ENST00000543002 IDUAP35475 653 aa15.31■□□□□ 0.04
RABGGTA-203ENST00000543002 TAS2R41P59536 307 aa15.31■□□□□ 0.04
RABGGTA-203ENST00000543002 EGR4Q05215 589 aa15.31■□□□□ 0.04
RABGGTA-203ENST00000543002 PIN1Q13526 163 aaPredicted RBP15.31■□□□□ 0.04
RABGGTA-203ENST00000543002 MTX3Q5HYI7 312 aa15.31■□□□□ 0.04
RABGGTA-203ENST00000543002 C1orf140Q5VVS0 124 aa15.31■□□□□ 0.04
RABGGTA-203ENST00000543002 LCN8Q6JVE9 175 aa15.31■□□□□ 0.04
RABGGTA-203ENST00000543002 PPP4R4Q6NUP7 873 aa15.31■□□□□ 0.04
RABGGTA-203ENST00000543002 C5orf46Q6UWT4 87 aa15.31■□□□□ 0.04
RABGGTA-203ENST00000543002 CYP2R1Q6VVX0 501 aa15.31■□□□□ 0.04
RABGGTA-203ENST00000543002 GDF7Q7Z4P5 450 aa15.31■□□□□ 0.04
RABGGTA-203ENST00000543002 DHFR2Q86XF0 187 aa15.31■□□□□ 0.04
RABGGTA-203ENST00000543002 CCDC71Q8IV32 467 aaPredicted RBP15.31■□□□□ 0.04
RABGGTA-203ENST00000543002 FAM86B1Q8N7N1 296 aa15.31■□□□□ 0.04
RABGGTA-203ENST00000543002 ROBO4Q8WZ75 1007 aa15.31■□□□□ 0.04
RABGGTA-203ENST00000543002 CCDC124Q96CT7 223 aaKnown RBP15.31■□□□□ 0.04
RABGGTA-203ENST00000543002 DNAJA3Q96EY1 480 aa15.31■□□□□ 0.04
RABGGTA-203ENST00000543002 SLC41A3Q96GZ6 507 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms