RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 CRLF1O75462 422 aa17.47■□□□□ 0.39
DDX11-220ENST00000542244 EPHA3P29320 983 aa17.47■□□□□ 0.39
DDX11-220ENST00000542244 IDUAP35475 653 aa17.47■□□□□ 0.39
DDX11-220ENST00000542244 WDR4P57081 412 aaKnown RBP17.47■□□□□ 0.39
DDX11-220ENST00000542244 H3F3AP84243 136 aa17.47■□□□□ 0.39
DDX11-220ENST00000542244 GABRA6Q16445 453 aa17.47■□□□□ 0.39
DDX11-220ENST00000542244 C11orf71Q6IPW1 123 aa17.47■□□□□ 0.39
DDX11-220ENST00000542244 APH1AQ96BI3 265 aa17.47■□□□□ 0.39
DDX11-220ENST00000542244 TRMT61AQ96FX7 289 aaKnown RBP17.47■□□□□ 0.39
DDX11-220ENST00000542244 PAIP2Q9BPZ3 127 aaKnown RBP17.47■□□□□ 0.39
DDX11-220ENST00000542244 EXOSC3Q9NQT5 275 aaKnown RBP17.47■□□□□ 0.39
DDX11-220ENST00000542244 GPR45Q9Y5Y3 372 aa17.47■□□□□ 0.39
DDX11-220ENST00000542244 IGHV4-30-2A0A087WSY4 118 aa17.46■□□□□ 0.39
DDX11-220ENST00000542244 AGAP5A6NIR3 686 aa17.46■□□□□ 0.39
DDX11-220ENST00000542244 CCT8L1PA6NM43 557 aa17.46■□□□□ 0.39
DDX11-220ENST00000542244 PDLIM1O00151 329 aa17.46■□□□□ 0.39
DDX11-220ENST00000542244 TM9SF1O15321 606 aa17.46■□□□□ 0.39
DDX11-220ENST00000542244 AGR2O95994 175 aa17.46■□□□□ 0.39
DDX11-220ENST00000542244 RPS4Y1P22090 263 aaKnown RBP17.46■□□□□ 0.39
DDX11-220ENST00000542244 TACR3P29371 465 aa17.46■□□□□ 0.39
DDX11-220ENST00000542244 MVDP53602 400 aa17.46■□□□□ 0.39
DDX11-220ENST00000542244 SLC16A1P53985 500 aa17.46■□□□□ 0.39
DDX11-220ENST00000542244 GTDC1Q4AE62 458 aa17.46■□□□□ 0.39
DDX11-220ENST00000542244 CEP85LQ5SZL2 805 aa17.46■□□□□ 0.39
DDX11-220ENST00000542244 OGFOD2Q6N063 350 aa17.46■□□□□ 0.39
DDX11-220ENST00000542244 ZNF621Q6ZSS3 439 aa17.46■□□□□ 0.39
DDX11-220ENST00000542244 VRK2Q86Y07 508 aa17.46■□□□□ 0.39
DDX11-220ENST00000542244 ANKRD42Q8N9B4 389 aa17.46■□□□□ 0.39
DDX11-220ENST00000542244 ARL8AQ96BM9 186 aa17.46■□□□□ 0.39
DDX11-220ENST00000542244 MUCL1Q96DR8 90 aa17.46■□□□□ 0.39
DDX11-220ENST00000542244 SLC7A10Q9NS82 523 aa17.46■□□□□ 0.39
DDX11-220ENST00000542244 HDGFL3Q9Y3E1 203 aa17.46■□□□□ 0.39
DDX11-220ENST00000542244 ALPK2Q86TB3 2170 aa17.46■□□□□ 0.39
DDX11-220ENST00000542244 CUBNO60494 3623 aa17.46■□□□□ 0.38
DDX11-220ENST00000542244 A0A096LNT2 108 aa17.45■□□□□ 0.38
DDX11-220ENST00000542244 CIB4A0PJX0 185 aa17.45■□□□□ 0.38
DDX11-220ENST00000542244 SSX4O60224 188 aa17.45■□□□□ 0.38
DDX11-220ENST00000542244 GKN3PP0CG01 181 aa17.45■□□□□ 0.38
DDX11-220ENST00000542244 CD40P25942 277 aa17.45■□□□□ 0.38
DDX11-220ENST00000542244 CLNS1AP54105 237 aaKnown RBP17.45■□□□□ 0.38
DDX11-220ENST00000542244 LGALS3BPQ08380 585 aa17.45■□□□□ 0.38
DDX11-220ENST00000542244 BNIP2Q12982 314 aa17.45■□□□□ 0.38
DDX11-220ENST00000542244 MRPL2Q5T653 305 aaKnown RBP17.45■□□□□ 0.38
DDX11-220ENST00000542244 TSPO2Q5TGU0 170 aa17.45■□□□□ 0.38
DDX11-220ENST00000542244 MAVSQ7Z434 540 aa17.45■□□□□ 0.38
DDX11-220ENST00000542244 ZIC4Q8N9L1 334 aa17.45■□□□□ 0.38
DDX11-220ENST00000542244 VPS37AQ8NEZ2 397 aa17.45■□□□□ 0.38
DDX11-220ENST00000542244 PIGXQ8TBF5 258 aa17.45■□□□□ 0.38
DDX11-220ENST00000542244 MUS81Q96NY9 551 aa17.45■□□□□ 0.38
DDX11-220ENST00000542244 TRNT1Q96Q11 434 aaKnown RBP17.45■□□□□ 0.38
DDX11-220ENST00000542244 OR52E6Q96RD3 313 aa17.45■□□□□ 0.38
DDX11-220ENST00000542244 PANX1Q96RD7 426 aa17.45■□□□□ 0.38
DDX11-220ENST00000542244 USB1Q9BQ65 265 aaKnown RBP17.45■□□□□ 0.38
DDX11-220ENST00000542244 CACNG6Q9BXT2 260 aa17.45■□□□□ 0.38
DDX11-220ENST00000542244 EMC3Q9P0I2 261 aa17.45■□□□□ 0.38
DDX11-220ENST00000542244 TMEM181Q9P2C4 612 aa17.45■□□□□ 0.38
DDX11-220ENST00000542244 MALT1Q9UDY8 824 aa17.45■□□□□ 0.38
DDX11-220ENST00000542244 CHST2Q9Y4C5 530 aa17.45■□□□□ 0.38
DDX11-220ENST00000542244 FLVCR1Q9Y5Y0 555 aa17.45■□□□□ 0.38
DDX11-220ENST00000542244 M0R1B8 84 aa17.44■□□□□ 0.38
DDX11-220ENST00000542244 PGRP06401 933 aa17.44■□□□□ 0.38
DDX11-220ENST00000542244 KITP10721 976 aa17.44■□□□□ 0.38
DDX11-220ENST00000542244 PRG2P13727 222 aa17.44■□□□□ 0.38
DDX11-220ENST00000542244 DMTNQ08495 405 aa17.44■□□□□ 0.38
DDX11-220ENST00000542244 EPS8Q12929 822 aa17.44■□□□□ 0.38
DDX11-220ENST00000542244 CASP12Q6UXS9 341 aa17.44■□□□□ 0.38
DDX11-220ENST00000542244 LRRC74BQ6ZQY2 392 aa17.44■□□□□ 0.38
DDX11-220ENST00000542244 TMEM99Q8N816 258 aa17.44■□□□□ 0.38
DDX11-220ENST00000542244 RSPO3Q9BXY4 272 aaPredicted RBP17.44■□□□□ 0.38
DDX11-220ENST00000542244 ASB6Q9NWX5 421 aa17.44■□□□□ 0.38
DDX11-220ENST00000542244 SPIN1Q9Y657 262 aaPredicted RBP17.44■□□□□ 0.38
DDX11-220ENST00000542244 MRPL33O75394 65 aaKnown RBP17.43■□□□□ 0.38
DDX11-220ENST00000542244 LY6HO94772 140 aa17.43■□□□□ 0.38
DDX11-220ENST00000542244 ETFAP13804 333 aa17.43■□□□□ 0.38
DDX11-220ENST00000542244 TTKP33981 857 aa17.43■□□□□ 0.38
DDX11-220ENST00000542244 ACAA2P42765 397 aaKnown RBP17.43■□□□□ 0.38
DDX11-220ENST00000542244 POLR2HP52434 150 aaKnown RBP17.43■□□□□ 0.38
DDX11-220ENST00000542244 SLC17A1Q14916 467 aa17.43■□□□□ 0.38
DDX11-220ENST00000542244 RPS26P11Q5JNZ5 115 aaPredicted RBP17.43■□□□□ 0.38
DDX11-220ENST00000542244 SLC22A25Q6T423 547 aa17.43■□□□□ 0.38
DDX11-220ENST00000542244 ZNF836Q6ZNA1 936 aa17.43■□□□□ 0.38
DDX11-220ENST00000542244 P2RY8Q86VZ1 359 aa17.43■□□□□ 0.38
DDX11-220ENST00000542244 MGARPQ8TDB4 240 aa17.43■□□□□ 0.38
DDX11-220ENST00000542244 WDR60Q8WVS4 1066 aa17.43■□□□□ 0.38
DDX11-220ENST00000542244 ZHX1-C8orf76Q96EF9 292 aa17.43■□□□□ 0.38
DDX11-220ENST00000542244 AURKBQ96GD4 344 aaPredicted RBP17.43■□□□□ 0.38
DDX11-220ENST00000542244 ZNF385AQ96PM9 386 aaKnown RBP17.43■□□□□ 0.38
DDX11-220ENST00000542244 ADAM19Q9H013 955 aa17.43■□□□□ 0.38
DDX11-220ENST00000542244 TAS2R16Q9NYV7 291 aa17.43■□□□□ 0.38
DDX11-220ENST00000542244 TRAPPC4Q9Y296 219 aa17.43■□□□□ 0.38
DDX11-220ENST00000542244 AKR7A3O95154 331 aa17.42■□□□□ 0.38
DDX11-220ENST00000542244 NR2F1P10589 423 aa17.42■□□□□ 0.38
DDX11-220ENST00000542244 SLC1A3P43003 542 aa17.42■□□□□ 0.38
DDX11-220ENST00000542244 MAGEA8P43361 318 aa17.42■□□□□ 0.38
DDX11-220ENST00000542244 CLK1P49759 484 aaKnown RBP17.42■□□□□ 0.38
DDX11-220ENST00000542244 HPCAP84074 193 aa17.42■□□□□ 0.38
DDX11-220ENST00000542244 CEACAM7Q14002 265 aa17.42■□□□□ 0.38
DDX11-220ENST00000542244 DPY19L1Q2PZI1 675 aa17.42■□□□□ 0.38
DDX11-220ENST00000542244 SLC9B1Q4ZJI4 515 aa17.42■□□□□ 0.38
DDX11-220ENST00000542244 LRRC34Q8IZ02 419 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms