RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 NR4A3Q92570 626 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 CDCA4Q9BXL8 241 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 PLCXD1Q9NUJ7 323 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 CACNG2Q9Y698 323 aa14.92□□□□□ -0.02
VARS2-212ENST00000542001 RBBP6Q7Z6E9 1792 aaKnown RBP14.91□□□□□ -0.02
VARS2-212ENST00000542001 HCKP08631 526 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 PTHLHP12272 177 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 ZNF20P17024 532 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 CCNOP22674 350 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 GZMMP51124 257 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 GNG2P59768 71 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 FCN2Q15485 313 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 PRSS53Q2L4Q9 553 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 FAAP20Q6NZ36 180 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 PLPP6Q8IY26 295 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 LSM14AQ8ND56 463 aaKnown RBP14.91□□□□□ -0.02
VARS2-212ENST00000542001 ZNF707Q96C28 371 aaPredicted RBP14.91□□□□□ -0.02
VARS2-212ENST00000542001 TEAD3Q99594 435 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 DOK1Q99704 481 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 WDR77Q9BQA1 342 aaPredicted RBP14.91□□□□□ -0.02
VARS2-212ENST00000542001 ORAI3Q9BRQ5 295 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 PIGUQ9H490 435 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 GSKIPQ9P0R6 139 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 KLHL9Q9P2J3 617 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 EXO1Q9UQ84 846 aaKnown RBP14.91□□□□□ -0.02
VARS2-212ENST00000542001 ZNF726A6NNF4 738 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 ITGA5P08648 1049 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 SNRPGP62308 76 aaKnown RBP14.91□□□□□ -0.02
VARS2-212ENST00000542001 SGCAQ16586 387 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 LGALS14Q8TCE9 139 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 KIR3DX1Q9H7L2 352 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 GREB1Q4ZG55 1949 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 BRCA1P38398 1863 aaKnown RBP14.91□□□□□ -0.02
VARS2-212ENST00000542001 ARPC5O15511 151 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 PRAMEF2O60811 474 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 EML2O95834 649 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 ELK1P19419 428 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 ERP29P30040 261 aaKnown RBP14.91□□□□□ -0.02
VARS2-212ENST00000542001 YOD1Q5VVQ6 348 aaPredicted RBP14.91□□□□□ -0.02
VARS2-212ENST00000542001 FAM26EQ8N5C1 309 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 TMEM156Q8N614 296 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 OR4K17Q8NGC6 315 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 BTBD2Q9BX70 525 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 SYT4Q9H2B2 425 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 C20orf141Q9NUB4 165 aa14.91□□□□□ -0.02
VARS2-212ENST00000542001 MGAMO43451 1857 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 OR5K4A6NMS3 321 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 CTSVO60911 334 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 PPM1BO75688 479 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 S1PR1P21453 382 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 PSMA3P25788 255 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 OR3A3P47888 321 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 OR3A2P47893 321 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 CEBPGP53567 150 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 LAIR2Q6ISS4 152 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 ULK3Q6PHR2 472 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 SLC6A18Q96N87 628 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 GAS2L1Q99501 681 aaPredicted RBP14.9□□□□□ -0.02
VARS2-212ENST00000542001 EVA1BQ9NVM1 165 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 FTSJ1Q9UET6 329 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 PFDN2Q9UHV9 154 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 CBLCQ9ULV8 474 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.9□□□□□ -0.02
VARS2-212ENST00000542001 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.9□□□□□ -0.02
VARS2-212ENST00000542001 RABIFP47224 123 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 E2F1Q01094 437 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 PCGF3Q3KNV8 242 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 SFXN4Q6P4A7 337 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 SFXN5Q8TD22 340 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 NOX4Q9NPH5 578 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 PRDM7Q9NQW5 492 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 HMX3A6NHT5 357 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 FABP7O15540 132 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 LILRB3O75022 631 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 SYPP08247 313 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 UCHL1P09936 223 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 PEG10Q86TG7 708 aaKnown RBP14.9□□□□□ -0.02
VARS2-212ENST00000542001 OR51J1Q9H342 316 aa14.9□□□□□ -0.02
VARS2-212ENST00000542001 TRAPPC6AO75865 159 aa14.89□□□□□ -0.03
VARS2-212ENST00000542001 ALDOBP05062 364 aa14.89□□□□□ -0.03
VARS2-212ENST00000542001 HEXBP07686 556 aa14.89□□□□□ -0.03
VARS2-212ENST00000542001 FBLP22087 321 aaKnown RBP14.89□□□□□ -0.03
VARS2-212ENST00000542001 SPOCK1Q08629 439 aa14.89□□□□□ -0.03
VARS2-212ENST00000542001 RPL13AP3Q6NVV1 102 aa14.89□□□□□ -0.03
VARS2-212ENST00000542001 ZNF620Q6ZNG0 422 aa14.89□□□□□ -0.03
VARS2-212ENST00000542001 OR2T4Q8NH00 348 aa14.89□□□□□ -0.03
VARS2-212ENST00000542001 OR51Q1Q8NH59 317 aa14.89□□□□□ -0.03
VARS2-212ENST00000542001 SYNPRQ8TBG9 265 aa14.89□□□□□ -0.03
VARS2-212ENST00000542001 SLC25A46Q96AG3 418 aa14.89□□□□□ -0.03
VARS2-212ENST00000542001 ELMOD3Q96FG2 381 aa14.89□□□□□ -0.03
VARS2-212ENST00000542001 ZDHHC12Q96GR4 267 aa14.89□□□□□ -0.03
VARS2-212ENST00000542001 GPA33Q99795 319 aa14.89□□□□□ -0.03
VARS2-212ENST00000542001 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.89□□□□□ -0.03
VARS2-212ENST00000542001 GCM2O75603 506 aaPredicted RBP14.89□□□□□ -0.03
VARS2-212ENST00000542001 HLA-DMAP28067 261 aa14.89□□□□□ -0.03
VARS2-212ENST00000542001 ART1P52961 327 aa14.89□□□□□ -0.03
VARS2-212ENST00000542001 DUSP2Q05923 314 aa14.89□□□□□ -0.03
VARS2-212ENST00000542001 ELOAQ14241 798 aaKnown RBP14.89□□□□□ -0.03
VARS2-212ENST00000542001 PYHIN1Q6K0P9 492 aa14.89□□□□□ -0.03
VARS2-212ENST00000542001 MED25Q71SY5 747 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms