RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 ZCCHC18P0CG32 403 aa10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 TFPIP10646 304 aa10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 CCNA2P20248 432 aa10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 FKBP2P26885 142 aaKnown RBP10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 TACR3P29371 465 aa10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 SLC1A3P43003 542 aa10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 ATP5J2P56134 94 aa10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 RPS4XP62701 263 aaKnown RBP10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 EPS8Q12929 822 aa10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 PPA1Q15181 289 aa10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 GABRA6Q16445 453 aa10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 PDCD4Q53EL6 469 aaKnown RBP10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 HHATQ5VTY9 493 aa10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 P2RY8Q86VZ1 359 aa10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 GLB1L3Q8NCI6 653 aaPredicted RBP10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 ZNF563Q8TA94 476 aa10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 PNPT1Q8TCS8 783 aaKnown RBP10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 PMM1Q92871 262 aa10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 FBXW5Q969U6 566 aa10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 OR52B2Q96RD2 323 aa10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 TRAF4Q9BUZ4 470 aaPredicted RBP10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 GRIP2Q9C0E4 1043 aa10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 NGBQ9NPG2 151 aa10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 SDR39U1Q9NRG7 319 aaPredicted RBP10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 TMEM181Q9P2C4 612 aa10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 SLC25A15Q9Y619 301 aa10.4□□□□□ -0.74
CLSTN3-211ENST00000541667 CDHR4A6H8M9 788 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 SLC22A3O75751 556 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 IGHV4-39P01824 125 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 IL6P05231 212 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 ITGA5P08648 1049 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 GKN3PP0CG01 181 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 KITP10721 976 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 ETFAP13804 333 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 HOXB9P17482 250 aaPredicted RBP10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 GGT1P19440 569 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 MAGEA8P43361 318 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 HTR3AP46098 478 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 P2RY4P51582 365 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 OR2B6P58173 313 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 TXNL4AP83876 142 aaKnown RBP10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 SLC17A1Q14916 467 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 GTDC1Q4AE62 458 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 BEND6Q5SZJ8 279 aaPredicted RBP10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 MRPL2Q5T653 305 aaKnown RBP10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 CROCCP2Q86T23 111 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 DTX2Q86UW9 622 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 VRK2Q86Y07 508 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 ZNF100Q8IYN0 542 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 CLIP4Q8N3C7 705 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 TRIML2Q8N7C3 387 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 OR52E4Q8NGH9 312 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 MGARPQ8TDB4 240 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 SLC38A5Q8WUX1 472 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 VPS33AQ96AX1 596 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 AMBRA1Q9C0C7 1298 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 MANSC1Q9H8J5 431 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 TMBIM4Q9HC24 238 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 CISD1Q9NZ45 108 aaKnown RBP10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 MALT1Q9UDY8 824 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 NOSIPQ9Y314 301 aaKnown RBP10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 FLVCR1Q9Y5Y0 555 aa10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 SPIN1Q9Y657 262 aaPredicted RBP10.39□□□□□ -0.75
CLSTN3-211ENST00000541667 ABCA1O95477 2261 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 CFAP73A6NFT4 308 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 TRPC5OSA6NMA1 111 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 KIAA1324LA8MWY0 1029 aaPredicted RBP10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 E7EQL1 145 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 SLCO1B7G3V0H7 640 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 RFXANKO14593 260 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 DBIP07108 87 aaKnown RBP10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 NR2F1P10589 423 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 PRG2P13727 222 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 CDKN1AP38936 164 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 POLR2HP52434 150 aaKnown RBP10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 MAGOHP61326 146 aaKnown RBP10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 LRRC74AQ0VAA2 488 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 STK11Q15831 433 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 GSTA3Q16772 222 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 CLEC12BQ2HXU8 276 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 ZNF836Q6ZNA1 936 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 OR9I1Q8NGQ6 314 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 PIGXQ8TBF5 258 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 WDR60Q8WVS4 1066 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 APH1AQ96BI3 265 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 SLCO5A1Q9H2Y9 848 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 TPT1P8Q9HAU6 139 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 SLC52A3Q9NQ40 469 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 SLC7A10Q9NS82 523 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 ZIM2Q9NZV7 527 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 GDF2Q9UK05 429 aaPredicted RBP10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 ADAM21Q9UKJ8 722 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 CR1P17927 2039 aa10.38□□□□□ -0.75
CLSTN3-211ENST00000541667 SONP18583 2426 aaKnown RBP10.37□□□□□ -0.75
CLSTN3-211ENST00000541667 A0A1W2PR80 420 aa10.37□□□□□ -0.75
CLSTN3-211ENST00000541667 LIPT2A6NK58 231 aa10.37□□□□□ -0.75
CLSTN3-211ENST00000541667 INAFM1C9JVW0 142 aa10.37□□□□□ -0.75
CLSTN3-211ENST00000541667 GPR171O14626 319 aa10.37□□□□□ -0.75
CLSTN3-211ENST00000541667 ABCD4O14678 606 aa10.37□□□□□ -0.75
CLSTN3-211ENST00000541667 KLF11O14901 512 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms