RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, human

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-219	ENST00000541513	LGI2	Q8N0V4	545 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	CLEC4F	Q8N1N0	589 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	ARHGAP18	Q8N392	663 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	PARP8	Q8N3A8	854 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	POC1A	Q8NBT0	407 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	OR10H4	Q8NGA5	316 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	NUDCD2	Q8WVJ2	157 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	OPALIN	Q96PE5	141 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	SLC38A2	Q96QD8	506 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	PELO	Q9BRX2	385 aa	Known RBP	4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	TUBGCP2	Q9BSJ2	902 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	DUSP16	Q9BY84	665 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	OPN3	Q9H1Y3	402 aa	Predicted RBP	4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	HIPK2	Q9H2X6	1198 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	TPK1	Q9H3S4	243 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	NXF3	Q9H4D5	531 aa	Known RBP	4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	TLE6	Q9H808	572 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	SEMA4G	Q9NTN9	838 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	DMAC2	Q9NW81	257 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	CLEC5A	Q9NY25	188 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	PTTG3P	Q9NZH4	202 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	CLN8	Q9UBY8	286 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	SIX4	Q9UIU6	781 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	ZNF229	Q9UJW7	825 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	NPIPA1	Q9UND3	350 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	FLVCR2	Q9UPI3	526 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	MEMO1	Q9Y316	297 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	TIMM10B	Q9Y5J6	103 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	RAI2	Q9Y5P3	530 aa		4.92	□□□□□ -1.62
DDB1-219	ENST00000541513	ARL5C	A6NH57	179 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	CCT8L1P	A6NM43	557 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	SRRM4	A7MD48	611 aa	Known RBP	4.91	□□□□□ -1.62
DDB1-219	ENST00000541513		H0YJX3	145 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	OVOL3	O00110	214 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	PGRMC1	O00264	195 aa	Known RBP	4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	GAPDHS	O14556	408 aa	Predicted RBP	4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	AIM2	O14862	343 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	RAB29	O14966	203 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	SCAMP2	O15127	329 aa	Known RBP	4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	CLOCK	O15516	846 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	COCH	O43405	550 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	DENR	O43583	198 aa	Known RBP	4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	OR2J3	O76001	311 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	B3GAT3	O94766	335 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	FCER2	P06734	321 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	SLC35G4	P0C7Q5	338 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	KCNE1	P15382	129 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	ITGA2	P17301	1181 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	PGC	P20142	388 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	RAB4A	P20338	218 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	CD82	P27701	267 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	SLC26A3	P40879	764 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	HTR5A	P47898	357 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	NOVA1	P51513	510 aa	Known RBP	4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	SGSH	P51688	502 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	RAP1GDS1	P52306	607 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	ELL	P55199	621 aa	Predicted RBP	4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	PRPS1	P60891	318 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	CX3CL1	P78423	397 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	ADARB1	P78563	741 aa	Known RBP	4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	GLO1	Q04760	184 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	SIGLEC14	Q08ET2	396 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	STX3	Q13277	289 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	CDSN	Q15517	529 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	SNAI3	Q3KNW1	292 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	AWAT1	Q58HT5	328 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	CLLU1OS	Q5K130	101 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	CDKL4	Q5MAI5	379 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	C6orf183	Q5T699	404 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	AGAP7P	Q5VUJ5	663 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	DMKN	Q6E0U4	476 aa	Predicted RBP	4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	OR52W1	Q6IF63	320 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	ARMCX5	Q6P1M9	558 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	ALKAL1	Q6UXT8	129 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	UNQ6126/PRO20091	Q6UXV3	157 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	ZNF562	Q6V9R5	426 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513		Q6ZRM9	215 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	FAM122B	Q7Z309	247 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	P4HA3	Q7Z4N8	544 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	NET1	Q7Z628	596 aa	Predicted RBP	4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	ZNF761	Q86XN6	746 aa	Predicted RBP	4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	CCDC50	Q8IVM0	306 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	IQCK	Q8N0W5	287 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	GPD1L	Q8N335	351 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	FGFRL1	Q8N441	504 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513		Q8N9G6	341 aa	Predicted RBP	4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	FBXO36	Q8NEA4	188 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	STXBP6	Q8NFX7	210 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	OR5R1	Q8NH85	324 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	HMGCLL1	Q8TB92	370 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	WFIKKN2	Q8TEU8	576 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	HTR3C	Q8WXA8	447 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	AGAP4	Q96P64	663 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	MACROD1	Q9BQ69	325 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	MEGF9	Q9H1U4	602 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	SAV1	Q9H4B6	383 aa	Predicted RBP	4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	ASB7	Q9H672	318 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	ZNF703	Q9H7S9	590 aa	Predicted RBP	4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	RNF121	Q9H920	327 aa		4.91	□□□□□ -1.62
DDB1-219	ENST00000541513	POLE4	Q9NR33	117 aa		4.91	□□□□□ -1.62

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