RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 TCEA1P23193 301 aaKnown RBP7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 CCKARP32238 428 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 LSP1P33241 339 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 CDKN1AP38936 164 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 CRATP43155 626 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 GZMKP49863 264 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 KHKP50053 298 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 DSCR4P56555 118 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 CLDN15P56746 228 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 PLAURQ03405 335 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 KLF10Q13118 480 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 RGNQ15493 299 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 NRF1Q16656 503 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 TMEM44Q2T9K0 475 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 NDUFAF6Q330K2 333 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 MIDNQ504T8 468 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 RUNDC3AQ59EK9 446 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 PDZK1Q5T2W1 519 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 ZNF474Q6S9Z5 364 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 C22orf34Q6ZV56 151 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 IL17RELQ6ZVW7 336 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 C16orf62Q7Z3J2 963 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 MTERF4Q7Z6M4 381 aaKnown RBP7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 HMGN2P46Q86SG4 172 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 GCNT2Q8N0V5 402 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 DPP10Q8N608 796 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 OR4K17Q8NGC6 315 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 OR5M1Q8NGP8 315 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 OR14L1PQ8NHC6 308 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 PHOSPHO1Q8TCT1 267 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 FBXW5Q969U6 566 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 STARD4Q96DR4 205 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 C1GALT1C1Q96EU7 318 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 TRNT1Q96Q11 434 aaKnown RBP7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 ELAC2Q9BQ52 826 aaKnown RBP7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 TUBA1CQ9BQE3 449 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 NMUR2Q9GZQ4 415 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 QRSL1Q9H0R6 528 aaKnown RBP7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 SLC38A1Q9H2H9 487 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 IKZF5Q9H5V7 419 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 TAS2R10Q9NYW0 307 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 ICAM5Q9UMF0 924 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 ZNF337Q9Y3M9 751 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 WDR45Q9Y484 360 aa7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 PRKDCP78527 4128 aaKnown RBP7.88□□□□□ -1.15
TRAPPC1-202ENST00000540486 LOC100653049A0A140TA62 436 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 CLDN24A6NM45 220 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 EFNA2O43921 213 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 SSX4O60224 188 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 TNFRSF21O75509 655 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 KRT34O76011 436 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 LINGO3P0C6S8 592 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 HPGDP15428 266 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 ZNF16P17020 682 aaPredicted RBP7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 PSMA4P25789 261 aaKnown RBP7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 GCKP35557 465 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 PGM1P36871 562 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 MAGEA8P43361 318 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 KCNJ5P48544 419 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 SUCLG1P53597 346 aaKnown RBP7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 TXNL4AP83876 142 aaKnown RBP7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 ZNF117Q03924 483 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 SELPLGQ14242 412 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 TOMM34Q15785 309 aaPredicted RBP7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 GLYR1Q49A26 553 aaPredicted RBP7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 GPAT3Q53EU6 434 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 ATAD3BQ5T9A4 648 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 PLXDC2Q6UX71 529 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 LINC00114Q6XXX2 140 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 LRRC74BQ6ZQY2 392 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 ZNF619Q8N2I2 560 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 B4GALNT2Q8NHY0 566 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 POC1BQ8TC44 478 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 SMAP2Q8WU79 429 aaPredicted RBP7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 SLC38A5Q8WUX1 472 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 PLPPR2Q96GM1 343 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 SH3YL1Q96HL8 342 aaPredicted RBP7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 PTGES2Q9H7Z7 377 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 MTHFD2LQ9H903 347 aaPredicted RBP7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 POLE3Q9NRF9 147 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 CLCF1Q9UBD9 225 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 LEF1Q9UJU2 399 aaPredicted RBP7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 CARD8Q9Y2G2 431 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 CHST2Q9Y4C5 530 aa7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 MAGED1Q9Y5V3 778 aaPredicted RBP7.87□□□□□ -1.15
TRAPPC1-202ENST00000540486 TMEM89A2RUT3 159 aa7.86□□□□□ -1.15
TRAPPC1-202ENST00000540486 OR2M5A3KFT3 312 aa7.86□□□□□ -1.15
TRAPPC1-202ENST00000540486 AGAP5A6NIR3 686 aa7.86□□□□□ -1.15
TRAPPC1-202ENST00000540486 H0Y3Z8 333 aa7.86□□□□□ -1.15
TRAPPC1-202ENST00000540486 H0YC42 278 aa7.86□□□□□ -1.15
TRAPPC1-202ENST00000540486 ZNF264O43296 627 aa7.86□□□□□ -1.15
TRAPPC1-202ENST00000540486 HCRTR2O43614 444 aa7.86□□□□□ -1.15
TRAPPC1-202ENST00000540486 KIAA0513O60268 411 aa7.86□□□□□ -1.15
TRAPPC1-202ENST00000540486 SNX3O60493 162 aa7.86□□□□□ -1.15
TRAPPC1-202ENST00000540486 DNAJA2O60884 412 aa7.86□□□□□ -1.15
TRAPPC1-202ENST00000540486 NDUFS7O75251 213 aa7.86□□□□□ -1.15
TRAPPC1-202ENST00000540486 THBDP07204 575 aa7.86□□□□□ -1.15
TRAPPC1-202ENST00000540486 NR2F1P10589 423 aa7.86□□□□□ -1.15
TRAPPC1-202ENST00000540486 RPS4Y1P22090 263 aaKnown RBP7.86□□□□□ -1.15
TRAPPC1-202ENST00000540486 LHX2P50458 406 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms