RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 SCN2BO60939 215 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 ARL6IP5O75915 188 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 ZNF19P17023 458 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 BMP7P18075 431 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 CR2P20023 1033 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 CD9P21926 228 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 NOS3P29474 1203 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 SOX18P35713 384 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 PIN1Q13526 163 aaPredicted RBP8.07□□□□□ -1.12
DDB1-217ENST00000540166 TAF13Q15543 124 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 UNQ6494/PRO21346Q6UXR6 183 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 ZNF546Q86UE3 836 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 LNX2Q8N448 690 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 FAM26EQ8N5C1 309 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 ACBD7Q8N6N7 88 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 OR52L1Q8NGH7 329 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 HUS1BQ8NHY5 278 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 CNTNAP3BQ96NU0 1288 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 SSX3Q99909 188 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 SLITRK2Q9H156 845 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 PIGMQ9H3S5 423 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 SUV39H2Q9H5I1 410 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 SLC25A19Q9HC21 320 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 ZFP57Q9NU63 452 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 BABAM2Q9NXR7 383 aa8.07□□□□□ -1.12
DDB1-217ENST00000540166 LSM2Q9Y333 95 aaKnown RBP8.07□□□□□ -1.12
DDB1-217ENST00000540166 H7C0S8 307 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 SMAD9O15198 467 aaKnown RBP8.06□□□□□ -1.12
DDB1-217ENST00000540166 SMAD6O43541 496 aaKnown RBP8.06□□□□□ -1.12
DDB1-217ENST00000540166 HPXP02790 462 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 PRKAR1BP31321 381 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 ACVR1BP36896 505 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 RAG2P55895 527 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 CLDN2P57739 230 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 RPS13P62277 151 aaKnown RBP8.06□□□□□ -1.12
DDB1-217ENST00000540166 SORDQ00796 357 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 DOC2AQ14183 400 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 RNF212Q495C1 297 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 FAM74A1Q5RGS3 127 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 COX20Q5RI15 118 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 SMARCD3Q6STE5 483 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 PRSS45Q7RTY3 260 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 ZNF551Q7Z340 670 aaPredicted RBP8.06□□□□□ -1.12
DDB1-217ENST00000540166 ADCK2Q7Z695 626 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 MCATQ8IVS2 390 aaKnown RBP8.06□□□□□ -1.12
DDB1-217ENST00000540166 BEST3Q8N1M1 668 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 GTPBP8Q8N3Z3 284 aaPredicted RBP8.06□□□□□ -1.12
DDB1-217ENST00000540166 C2orf73Q8N5S3 287 aaPredicted RBP8.06□□□□□ -1.12
DDB1-217ENST00000540166 FAM174AQ8TBP5 190 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 RAB8BQ92930 207 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 PINK1Q9BXM7 581 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 OR51V1Q9H2C8 321 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 TMEM74BQ9NUR3 256 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 DLL3Q9NYJ7 618 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 KLHL9Q9P2J3 617 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 TRAPPC13A5PLN9 417 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 LRIT2A6NDA9 550 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 STMND1H3BQB6 276 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 DNASE2O00115 360 aaPredicted RBP8.06□□□□□ -1.12
DDB1-217ENST00000540166 SOX30O94993 753 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 MT-ND5P03915 603 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 FGF2P09038 288 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 CCR7P32248 378 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 PI4KAP42356 2102 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 ANXA11P50995 505 aaKnown RBP8.06□□□□□ -1.12
DDB1-217ENST00000540166 CCR5P51681 352 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 UBE2IP63279 158 aaKnown RBP8.06□□□□□ -1.12
DDB1-217ENST00000540166 MINDY4Q4G0A6 757 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 FAM76BQ5HYJ3 339 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 CBLN2Q8IUK8 224 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 PIGXQ8TBF5 258 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 ARL11Q969Q4 196 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 REEP4Q9H6H4 257 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 ASB6Q9NWX5 421 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 A0A1W2PQF6 199 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 PQLC2LA1A4F0 135 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 CPSF4LA6NMK7 179 aaKnown RBP8.06□□□□□ -1.12
DDB1-217ENST00000540166 GPR31O00270 319 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 SPP1P10451 314 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 ZNF35P13682 527 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 ADRB3P13945 408 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 SNRPBP14678 240 aaKnown RBP8.06□□□□□ -1.12
DDB1-217ENST00000540166 IFNGR1P15260 489 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 UGT2B7P16662 529 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 RFC3P40938 356 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 TRAM2Q15035 370 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 CDKN3Q16667 212 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 OLFML2AQ68BL7 652 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 FAM180BQ6P0A1 224 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 MED27Q6P2C8 311 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 AGTRAPQ6RW13 159 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 ADIPOR2Q86V24 386 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 ZNF687Q8N1G0 1237 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 ARL14Q8N4G2 192 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 IL22RA1Q8N6P7 574 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 EXOSC8Q96B26 276 aaKnown RBP8.06□□□□□ -1.12
DDB1-217ENST00000540166 S100A16Q96FQ6 103 aaKnown RBP8.06□□□□□ -1.12
DDB1-217ENST00000540166 LURAP1Q96LR2 239 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 ABHD1Q96SE0 405 aa8.06□□□□□ -1.12
DDB1-217ENST00000540166 CNTNAP3Q9BZ76 1288 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms