RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 A4GNTQ9UNA3 340 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 TMED7Q9Y3B3 224 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 ZNF337Q9Y3M9 751 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 AP4B1Q9Y6B7 739 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 FREM3P0C091 2139 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 IGSF10Q6WRI0 2623 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 NCKAP5O14513 1909 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 GJE1A6NN92 205 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 H3BML4 177 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 AQP7O14520 342 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 SEMA7AO75326 666 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 PEPDP12955 493 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 BMP7P18075 431 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 POU3F2P20265 443 aaPredicted RBP13.93□□□□□ -0.18
DDB1-216ENST00000539739 SMIM11AP58511 58 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 NHSL2Q5HYW2 709 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 ZFP1Q6P2D0 407 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 GDF7Q7Z4P5 450 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 ADGRG3Q86Y34 549 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 OFCC1Q8IZS5 231 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 PAPD5Q8NDF8 572 aaKnown RBP13.93□□□□□ -0.18
DDB1-216ENST00000539739 SLC25A43Q8WUT9 341 aaPredicted RBP13.93□□□□□ -0.18
DDB1-216ENST00000539739 SARAFQ96BY9 339 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 DUS3LQ96G46 650 aaKnown RBP13.93□□□□□ -0.18
DDB1-216ENST00000539739 BBC3Q96PG8 261 aaPredicted RBP13.93□□□□□ -0.18
DDB1-216ENST00000539739 PLGRKTQ9HBL7 147 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 ACAD8Q9UKU7 415 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 AP4S1Q9Y587 144 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 A0A087WUJ7 227 aa13.92□□□□□ -0.18
DDB1-216ENST00000539739 ADAMDEC1O15204 470 aa13.92□□□□□ -0.18
DDB1-216ENST00000539739 FKBP6O75344 327 aa13.92□□□□□ -0.18
DDB1-216ENST00000539739 DIRAS1O95057 198 aa13.92□□□□□ -0.18
DDB1-216ENST00000539739 MT-ND1P03886 318 aa13.92□□□□□ -0.18
DDB1-216ENST00000539739 ZNF12P17014 697 aa13.92□□□□□ -0.18
DDB1-216ENST00000539739 CCNA2P20248 432 aa13.92□□□□□ -0.18
DDB1-216ENST00000539739 FUT4P22083 530 aa13.92□□□□□ -0.18
DDB1-216ENST00000539739 TDGF1P3P51864 188 aa13.92□□□□□ -0.18
DDB1-216ENST00000539739 IQCCQ4KMZ1 466 aa13.92□□□□□ -0.18
DDB1-216ENST00000539739 VASNQ6EMK4 673 aa13.92□□□□□ -0.18
DDB1-216ENST00000539739 TSEN54Q7Z6J9 526 aaKnown RBP13.92□□□□□ -0.18
DDB1-216ENST00000539739 TSPYL5Q86VY4 417 aaPredicted RBP13.92□□□□□ -0.18
DDB1-216ENST00000539739 SLC7A5P1Q8MH63 180 aa13.92□□□□□ -0.18
DDB1-216ENST00000539739 LILRA2Q8N149 483 aa13.92□□□□□ -0.18
DDB1-216ENST00000539739 ATP6V1C2Q8NEY4 427 aa13.92□□□□□ -0.18
DDB1-216ENST00000539739 SMPDL3BQ92485 455 aa13.92□□□□□ -0.18
DDB1-216ENST00000539739 DDIT4LQ96D03 193 aa13.92□□□□□ -0.18
DDB1-216ENST00000539739 TPK1Q9H3S4 243 aa13.92□□□□□ -0.18
DDB1-216ENST00000539739 NMNAT1Q9HAN9 279 aaPredicted RBP13.92□□□□□ -0.18
DDB1-216ENST00000539739 RHCGQ9UBD6 479 aa13.92□□□□□ -0.18
DDB1-216ENST00000539739 ZFYVE26Q68DK2 2539 aa13.92□□□□□ -0.18
DDB1-216ENST00000539739 KMT2BQ9UMN6 2715 aaPredicted RBP13.92□□□□□ -0.18
DDB1-216ENST00000539739 ZNF407Q9C0G0 2248 aa13.92□□□□□ -0.18
DDB1-216ENST00000539739 COL6A6A6NMZ7 2263 aa13.91□□□□□ -0.18
DDB1-216ENST00000539739 A0A1B0GTH9 108 aa13.91□□□□□ -0.18
DDB1-216ENST00000539739 TMEM72A0PK05 275 aa13.91□□□□□ -0.18
DDB1-216ENST00000539739 OR14I1A6ND48 311 aa13.91□□□□□ -0.18
DDB1-216ENST00000539739 FFAR1O14842 300 aa13.91□□□□□ -0.18
DDB1-216ENST00000539739 ZNF208O43345 1280 aa13.91□□□□□ -0.18
DDB1-216ENST00000539739 WISP2O76076 250 aa13.91□□□□□ -0.18
DDB1-216ENST00000539739 CST1P01037 141 aa13.91□□□□□ -0.18
DDB1-216ENST00000539739 H1F0P07305 194 aaKnown RBP13.91□□□□□ -0.18
DDB1-216ENST00000539739 EDN3P14138 238 aa13.91□□□□□ -0.18
DDB1-216ENST00000539739 STARP49675 285 aa13.91□□□□□ -0.18
DDB1-216ENST00000539739 SPIBQ01892 262 aa13.91□□□□□ -0.18
DDB1-216ENST00000539739 TRAM2Q15035 370 aa13.91□□□□□ -0.18
DDB1-216ENST00000539739 TTC33Q6PID6 262 aaPredicted RBP13.91□□□□□ -0.18
DDB1-216ENST00000539739 GFRALQ6UXV0 394 aa13.91□□□□□ -0.18
DDB1-216ENST00000539739 PIK3C3Q8NEB9 887 aa13.91□□□□□ -0.18
DDB1-216ENST00000539739 STMN2Q93045 179 aa13.91□□□□□ -0.18
DDB1-216ENST00000539739 SLCO4A1Q96BD0 722 aa13.91□□□□□ -0.18
DDB1-216ENST00000539739 HS6ST2Q96MM7 605 aa13.91□□□□□ -0.18
DDB1-216ENST00000539739 ANKRD19PQ9H560 264 aa13.91□□□□□ -0.18
DDB1-216ENST00000539739 TMEM185BQ9H7F4 350 aa13.91□□□□□ -0.18
DDB1-216ENST00000539739 ARMC1Q9NVT9 282 aa13.91□□□□□ -0.18
DDB1-216ENST00000539739 TESMINQ9Y4I5 508 aa13.91□□□□□ -0.18
DDB1-216ENST00000539739 DNAJC13O75165 2243 aa13.91□□□□□ -0.18
DDB1-216ENST00000539739 SVILO95425 2214 aa13.91□□□□□ -0.18
DDB1-216ENST00000539739 PRRC2CQ9Y520 2896 aaKnown RBP13.9□□□□□ -0.18
DDB1-216ENST00000539739 A8MVM7 634 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 NPIPA2E9PIF3 369 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 NPIPA3F8WFD2 350 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 GNGT2O14610 69 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 EFNA2O43921 213 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 ENTPD5O75356 428 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 KRT36O76013 467 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 PRSS23O95084 383 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 GADD45GO95257 159 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 WISP1O95388 367 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 THY1P04216 161 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 TFPIP10646 304 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 RRM2P31350 389 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 S100A5P33763 92 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 SFTPDP35247 375 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 CLK1P49759 484 aaKnown RBP13.9□□□□□ -0.18
DDB1-216ENST00000539739 LHX2P50458 406 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 CTAG1AP78358 180 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 HSF1Q00613 529 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 RBPJQ06330 500 aa13.9□□□□□ -0.18
DDB1-216ENST00000539739 CRYZQ08257 329 aaKnown RBP13.9□□□□□ -0.18
DDB1-216ENST00000539739 TMEM176BQ3YBM2 270 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms