RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 MAB21L2Q9Y586 359 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 RNGTTO60942 597 aaKnown RBP18.7■□□□□ 0.58
TMEM260-203ENST00000539559 NGFRP08138 427 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 ANXA7P20073 488 aaKnown RBP18.7■□□□□ 0.58
TMEM260-203ENST00000539559 DRD3P35462 400 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 RPS15P62841 145 aaKnown RBP18.7■□□□□ 0.58
TMEM260-203ENST00000539559 OPCMLQ14982 345 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 EXOSC7Q15024 291 aaKnown RBP18.7■□□□□ 0.58
TMEM260-203ENST00000539559 SHHQ15465 462 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 APOOLQ6UXV4 268 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 FGF13Q92913 245 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 RBPMSQ93062 196 aaKnown RBP18.7■□□□□ 0.58
TMEM260-203ENST00000539559 ELMOD3Q96FG2 381 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 GFI1Q99684 422 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 GSX2Q9BZM3 304 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 NOX4Q9NPH5 578 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 ACSL5Q9ULC5 683 aa18.7■□□□□ 0.58
TMEM260-203ENST00000539559 TRBV2A0A0J9YWF9 115 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 TBC1D3BA6NDS4 549 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 H3BSH0 61 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 ADAM11O75078 769 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 ZNF3P17036 446 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 OC90Q02509 493 aaPredicted RBP18.69■□□□□ 0.58
TMEM260-203ENST00000539559 DUSP8Q13202 625 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 CEBPEQ15744 281 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 HACD4Q5VWC8 232 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 KIAA1324Q6UXG2 1013 aaKnown RBP18.69■□□□□ 0.58
TMEM260-203ENST00000539559 NHLRC1Q6VVB1 395 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 SUSD6Q92537 303 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 SFXN2Q96NB2 322 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 ERMAPQ96PL5 475 aaPredicted RBP18.69■□□□□ 0.58
TMEM260-203ENST00000539559 MS4A7Q9GZW8 240 aaPredicted RBP18.69■□□□□ 0.58
TMEM260-203ENST00000539559 PRSS16Q9NQE7 514 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 ANKRD10Q9NXR5 420 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 MED31Q9Y3C7 131 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 PCDHGA9Q9Y5G4 932 aaKnown RBP18.69■□□□□ 0.58
TMEM260-203ENST00000539559 STON1Q9Y6Q2 735 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 LRRC72A6NJI9 287 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 FAM171A2A8MVW0 826 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 PRICKLE3O43900 615 aaPredicted RBP18.69■□□□□ 0.58
TMEM260-203ENST00000539559 SERPINI2O75830 405 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 FCER2P06734 321 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 ACSM4P0C7M7 580 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 UGT2B7P16662 529 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 NAT1P18440 290 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 EDNRAP25101 427 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 TAS2R43P59537 309 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 TRAM1Q15629 374 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 DCST2Q5T1A1 773 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 SLC22A10Q63ZE4 541 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 FCRLAQ7L513 359 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 CDK20Q8IZL9 346 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 SRFBP1Q8NEF9 429 aaKnown RBP18.69■□□□□ 0.58
TMEM260-203ENST00000539559 CXorf58Q96LI9 332 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 PTTG3PQ9NZH4 202 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 ZNF69Q9UC07 566 aa18.69■□□□□ 0.58
TMEM260-203ENST00000539559 GXYLT2A0PJZ3 443 aa18.68■□□□□ 0.58
TMEM260-203ENST00000539559 ARFIP1P53367 373 aa18.68■□□□□ 0.58
TMEM260-203ENST00000539559 CDK5R1Q15078 307 aa18.68■□□□□ 0.58
TMEM260-203ENST00000539559 GAB4Q2WGN9 574 aa18.68■□□□□ 0.58
TMEM260-203ENST00000539559 AMZ1Q400G9 498 aa18.68■□□□□ 0.58
TMEM260-203ENST00000539559 HDDC3Q8N4P3 179 aa18.68■□□□□ 0.58
TMEM260-203ENST00000539559 FAM98AQ8NCA5 519 aaKnown RBP18.68■□□□□ 0.58
TMEM260-203ENST00000539559 SEMA4CQ9C0C4 833 aa18.68■□□□□ 0.58
TMEM260-203ENST00000539559 INPP5EQ9NRR6 644 aa18.68■□□□□ 0.58
TMEM260-203ENST00000539559 ABRACLQ9P1F3 81 aa18.68■□□□□ 0.58
TMEM260-203ENST00000539559 COPS3Q9UNS2 423 aa18.68■□□□□ 0.58
TMEM260-203ENST00000539559 ADAM18Q9Y3Q7 739 aa18.68■□□□□ 0.58
TMEM260-203ENST00000539559 TBC1D3KA0A087X1G2 549 aa18.68■□□□□ 0.58
TMEM260-203ENST00000539559 TBC1D3FA6NER0 549 aaPredicted RBP18.68■□□□□ 0.58
TMEM260-203ENST00000539559 PIN1P1O15428 100 aa18.68■□□□□ 0.58
TMEM260-203ENST00000539559 PBX2P40425 430 aa18.68■□□□□ 0.58
TMEM260-203ENST00000539559 BTN1A1Q13410 526 aa18.68■□□□□ 0.58
TMEM260-203ENST00000539559 RUNX2Q13950 521 aa18.68■□□□□ 0.58
TMEM260-203ENST00000539559 TBC1D3GQ6DHY5 549 aa18.68■□□□□ 0.58
TMEM260-203ENST00000539559 SLC51BQ86UW2 128 aa18.68■□□□□ 0.58
TMEM260-203ENST00000539559 OR52B4Q8NGK2 314 aa18.68■□□□□ 0.58
TMEM260-203ENST00000539559 SNX33Q8WV41 574 aa18.68■□□□□ 0.58
TMEM260-203ENST00000539559 CNOT9Q92600 299 aaKnown RBP18.68■□□□□ 0.58
TMEM260-203ENST00000539559 SMIM19Q96E16 107 aa18.68■□□□□ 0.58
TMEM260-203ENST00000539559 ZNF346Q9UL40 294 aaKnown RBP18.68■□□□□ 0.58
TMEM260-203ENST00000539559 REV3LO60673 3130 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 KHDRBS3O75525 346 aaKnown RBP18.67■□□□□ 0.58
TMEM260-203ENST00000539559 HIST1H1CP16403 213 aaKnown RBP18.67■□□□□ 0.58
TMEM260-203ENST00000539559 PSMB1P20618 241 aaKnown RBP18.67■□□□□ 0.58
TMEM260-203ENST00000539559 TAGLNQ01995 201 aaKnown RBP18.67■□□□□ 0.58
TMEM260-203ENST00000539559 OR5M10Q6IEU7 315 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 FAM199XQ6PEV8 388 aaPredicted RBP18.67■□□□□ 0.58
TMEM260-203ENST00000539559 ZNF619Q8N2I2 560 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 OR2L13Q8N349 312 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 MFSD9Q8NBP5 474 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 OR4K14Q8NGD5 310 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 SLC25A38Q96DW6 304 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 POMT2Q9UKY4 750 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 LGALS8O00214 317 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 KHNYNO15037 678 aaKnown RBP18.67■□□□□ 0.58
TMEM260-203ENST00000539559 NUPL2O15504 423 aaKnown RBP18.67■□□□□ 0.58
TMEM260-203ENST00000539559 P2RX6O15547 441 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 SELENOFO60613 162 aa18.67■□□□□ 0.58
TMEM260-203ENST00000539559 EML2O95834 649 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms